Factsheet for HORVU6Hr1G053490.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G192300.1	Wheat	cytosol	96.97	96.97
TraesCS6A01G208800.2	Wheat	cytosol	96.49	96.49
TraesCS6B01G237800.1	Wheat	cytosol	96.33	96.49
Zm00001d017079_P001	Maize	cytosol	78.79	79.17
EES05363	Sorghum	cytosol, nucleus, plastid	79.74	77.76
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	77.03	77.03
GSMUA_Achr10P...	Banana	cytosol	50.56	56.31
GSMUA_Achr8P16390_001	Banana	cytosol	45.14	54.21
CDY72257	Canola	cytosol	41.79	51.78
CDY72267	Canola	cytosol	41.79	51.78
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	50.72	50.48
AT1G67900.2	Thale cress	nucleus	49.28	48.97
KRH69640	Soybean	cytosol	49.44	48.74
KRG99441	Soybean	cytosol	49.12	48.73
Bra004064.1-P	Field mustard	cytosol	48.8	48.65
Solyc05g013570.2.1	Tomato	nucleus	47.21	48.52
PGSC0003DMT400047866	Potato	cytosol	48.48	48.41
KRH74516	Soybean	cytosol	47.05	47.97
KRH45579	Soybean	nucleus	48.48	47.95
CDX83620	Canola	cytosol	37.32	42.78
CDY13635	Canola	cytosol	38.6	42.16
Bra025208.1-P	Field mustard	cytosol	38.6	42.16
AT3G26490.3	Thale cress	cytosol	38.6	41.16
HORVU4Hr1G069760.10	Barley	cytosol	33.49	34.31
HORVU5Hr1G018480.1	Barley	cytosol	34.45	34.29
HORVU5Hr1G064620.1	Barley	cytosol	32.7	32.18
HORVU7Hr1G030460.8	Barley	cytosol	33.33	31.67
HORVU3Hr1G076740.1	Barley	cytosol	31.1	30.33
HORVU7Hr1G073650.1	Barley	cytosol	30.46	29.8
HORVU5Hr1G093120.2	Barley	cytosol	29.51	29.18
HORVU5Hr1G093880.1	Barley	cytosol	19.3	29.09
HORVU6Hr1G015480.1	Barley	cytosol	32.54	27.91
HORVU5Hr1G093850.15	Barley	mitochondrion	29.19	27.9
HORVU7Hr1G097110.6	Barley	cytosol	23.92	27.68
HORVU0Hr1G012710.2	Barley	cytosol, plastid	25.52	27.49
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	28.39	27.43
HORVU4Hr1G069480.3	Barley	cytosol	26.63	27.24
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	29.35	26.86
HORVU5Hr1G046340.2	Barley	plastid	26.63	26.38
HORVU1Hr1G055870.1	Barley	plastid	27.11	25.56
HORVU4Hr1G023260.3	Barley	cytosol, plastid	23.92	23.96
HORVU0Hr1G011770.1	Barley	cytosol	17.07	23.52
HORVU5Hr1G010370.2	Barley	plastid	29.51	23.45

Protein Annotations

EnsemblPlants:HORVU6Hr1G053490.2	EnsemblPlantsGene:HORVU6Hr1G053490	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF33	PFAM:PF03000	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	UniParc:UPI000295F9E8	UniProt:M0XFG3	MapMan:35.1	:	:

Description

Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0XFG3]

Coordinates

chrchr6H:-:333319197..333322130

Molecular Weight (calculated)

67895.6 Da

IEP (calculated)

7.924

GRAVY (calculated)

-0.066

Length

627 amino acids

Sequence
(BLAST)

001: MKFMKLGNRP DTFFSPSDSE RSVYTEVATD LQILVGKCLY HLHKFPLLSK CLLLQALCAE SGCGGDGDLI ELAGFPGGAE AFEVCAKFCY GITITVSARN
101: LVPLRCAATH LGMSEAADRG NLVAKLDSFL ASCLLRRWKD ALAVLHSTRH NVPLCEELGL TSRCVNAVAD LIANPAAAVI PAKSTSASPW WAHDIAELGV
201: DMFWRIMVAV KSTGAVNEKT IGDALKTYAR RWLPNVAKDG LAAEQPFDDA AGASVKQIST RHRLLLEKIV SLLPVDKDAV SCAFLLKLLK AANILSASAA
301: SKAELVRRVA WQLEEASVSD LLIPSVSCMS DMLYDVDAVA AILHEFTLRH AAATAPARSP DDNSPARSDG HRRSRSDESV GFDGARRSSS AAPVSQYALA
401: RVGRLADAFL MEVAKDPHLP VEKLLAIAEA VPDSARPEHD GLYKVVHSYL KAHPEMSKSA RKRLCRVLNC RKLSEKACSH AAQNELLPLR VVVQVLFFEH
501: ARAAALSGAP VAGELPSNIK ALLSKSGSEE DDADRVDEQR LRALASGASP GDDWSVEGLR RAASKIATLR MKMEEEDEDD DEFVRKAGLS RSASLRFRAF
601: CAMPAGNPKR MLSKLWPLGR SVTADRH

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.