Factsheet for HORVU5Hr1G046340.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G146000.1	Wheat	plastid	98.1	98.57
TraesCS5B01G145100.1	Wheat	plastid	97.47	97.94
TraesCS5A01G146300.1	Wheat	plastid	97.47	97.94
HORVU0Hr1G011770.1	Barley	cytosol	69.19	96.26
Os11t0118500-00	Rice	plastid	84.36	83.05
Os12t0117600-01	Rice	plastid	84.68	82.33
EES16593	Sorghum	plastid	80.57	79.19
GSMUA_Achr7P21950_001	Banana	plastid	63.51	71.4
Zm00001d023313_P001	Maize	plastid	72.99	70.21
VIT_08s0056g00610.t01	Wine grape	cytosol	59.72	62.79
KRH00498	Soybean	cytosol, plastid	58.93	61.35
KRH40661	Soybean	plastid	58.77	61.18
PGSC0003DMT400010359	Potato	cytosol	55.45	60.73
Solyc09g048980.2.1	Tomato	cytosol	50.55	60.61
AT3G08570.1	Thale cress	plastid	54.19	55.59
AT3G08660.1	Thale cress	plastid	51.03	55.5
CDX73937	Canola	plastid	51.18	55.48
Bra001349.1-P	Field mustard	plastid	51.03	55.4
CDY00659	Canola	plastid	51.18	55.38
CDY09561	Canola	cytosol	51.34	53.81
CDY02305	Canola	cytosol	51.18	53.38
Bra032401.1-P	Field mustard	cytosol	51.03	53.21
HORVU1Hr1G055870.1	Barley	plastid	41.07	39.1
HORVU4Hr1G069480.3	Barley	cytosol	34.6	35.73
HORVU7Hr1G073650.1	Barley	cytosol	34.44	34.01
HORVU5Hr1G093120.2	Barley	cytosol	32.86	32.81
HORVU3Hr1G076740.1	Barley	cytosol	33.02	32.5
HORVU5Hr1G093880.1	Barley	cytosol	20.54	31.25
HORVU5Hr1G093850.15	Barley	mitochondrion	31.44	30.34
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	31.75	29.34
HORVU4Hr1G069760.10	Barley	cytosol	27.65	28.59
HORVU6Hr1G015480.1	Barley	cytosol	32.54	28.18
HORVU5Hr1G018480.1	Barley	cytosol	27.65	27.78
HORVU5Hr1G064620.1	Barley	cytosol	27.01	26.84
HORVU4Hr1G023260.3	Barley	cytosol, plastid	26.54	26.84
HORVU6Hr1G053490.2	Barley	cytosol	26.38	26.63
HORVU5Hr1G010370.2	Barley	plastid	33.02	26.49
HORVU7Hr1G030460.8	Barley	cytosol	27.01	25.91
HORVU7Hr1G097110.6	Barley	cytosol	19.59	22.88
HORVU0Hr1G012710.2	Barley	cytosol, plastid	20.06	21.82
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	22.12	21.57

Protein Annotations

EnsemblPlants:HORVU5Hr1G046340.2	EnsemblPlantsGene:HORVU5Hr1G046340	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	UniParc:UPI000B46A1BD	UniProt:A0A287R1X5	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:+:359827748..359831223

Molecular Weight (calculated)

70215.8 Da

IEP (calculated)

7.158

GRAVY (calculated)

-0.178

Length

633 amino acids

Sequence
(BLAST)

001: MGLASDSAGF PFSAKLSAAN SPRFCNPMSR RIFSDVAGDI TVSVHGQSFL LHKFPLVSRC GRIRRMVAEA KDPDLSKLEL VNVPGGATAF ELAVKFCYGS
101: NFEITTANVA HLRCIAEYLE MTEDYQEENL IVRTEMYLND LVVKNLEKSL QVLCACEGLD PMVEDIGFVD RCVDAIAMNA SKEQLVSGLA HLECDAGSGK
201: LRMHCQDWWV EDLSALRIDY YQRVIAAMRR SGVRPESIGT SIVHYAQTAL KGIERRHVWD SGPLVGDSQR VVVETLINLM ATEKITAVTL SFLFGMLRMA
301: IEVDAGLDYR IEVEKRIGLH LEMASLDDLL IPSMQTSESM FDVDTVHRIL VNFLQRIEED DSGDLSPCGY ESDGLKSPSH GSILKVGRLM DGYLAEIAPD
401: PYLKLQKFMT LIELLPDYAR IVDDGLYRAI DIYLKVAHPS LMESECKKLC KLIDCQKLSQ DASSHAAQND RLPMQMVVRV LYFEQLRLKS SFSGGHSGGG
501: EYCSFSQRIT MPISGSGVPS SCVSPRAAGA ADSYASLRRE NRELKLEVSR MRVRLTELER EQGMMKQGMR DGRPGEHGRA FFASISRGIG RMAMFGPAAG
601: ERRKKSSRAT GTATSHCSEG KSRRRKKASV TYA

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.