Factsheet for Solyc09g048980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010359	Potato	cytosol	95.83	87.54
VIT_08s0056g00610.t01	Wine grape	cytosol	75.38	66.11
KRH00498	Soybean	cytosol, plastid	72.73	63.16
KRH40661	Soybean	plastid	72.35	62.83
GSMUA_Achr7P21950_001	Banana	plastid	60.04	56.31
AT3G08570.1	Thale cress	plastid	61.74	52.84
CDY09561	Canola	cytosol	59.85	52.32
CDY02305	Canola	cytosol	59.66	51.89
EES16593	Sorghum	plastid	63.07	51.71
Bra032401.1-P	Field mustard	cytosol	59.28	51.57
Bra001349.1-P	Field mustard	plastid	56.63	51.29
HORVU0Hr1G011770.1	Barley	cytosol	44.13	51.21
TraesCS5D01G146000.1	Wheat	plastid	60.98	51.11
TraesCS5A01G146300.1	Wheat	plastid	60.98	51.11
CDX73937	Canola	plastid	56.44	51.03
TraesCS5B01G145100.1	Wheat	plastid	60.8	50.95
CDY00659	Canola	plastid	56.06	50.6
HORVU5Hr1G046340.2	Barley	plastid	60.61	50.55
AT3G08660.1	Thale cress	plastid	55.68	50.52
Os11t0118500-00	Rice	plastid	60.61	49.77
Os12t0117600-01	Rice	plastid	60.42	49.0
Zm00001d023313_P001	Maize	plastid	59.85	48.02
Solyc09g061250.2.1	Tomato	cytosol	52.46	45.63
Solyc09g074630.2.1	Tomato	cytosol	41.67	43.05
Solyc02g092560.2.1	Tomato	cytosol, nucleus	43.37	38.42
Solyc02g064720.2.1	Tomato	cytosol	40.34	35.21
Solyc07g043130.2.1	Tomato	cytosol	36.93	33.85
Solyc02g021640.2.1	Tomato	nucleus	37.12	31.16
Solyc02g090070.2.1	Tomato	nucleus	37.69	30.57
Solyc09g007820.1.1	Tomato	cytosol	33.52	29.65
Solyc10g047530.1.1	Tomato	cytosol	35.98	28.19
Solyc01g105680.2.1	Tomato	nucleus	35.42	27.95
Solyc05g051580.2.1	Tomato	cytosol	31.82	26.92
Solyc08g006870.2.1	Tomato	cytosol	31.25	26.83
Solyc10g049660.1.1	Tomato	cytosol	30.68	26.51
Solyc02g092480.2.1	Tomato	cytosol	30.49	25.64
Solyc05g013570.2.1	Tomato	nucleus	29.36	25.41
Solyc01g107180.2.1	Tomato	cytosol	30.11	25.4
Solyc03g044090.2.1	Tomato	cytosol	30.11	25.24
Solyc11g066730.1.1	Tomato	cytosol	30.11	25.2
Solyc01g098820.2.1	Tomato	cytosol, extracellular	25.95	24.73

Protein Annotations

EnsemblPlants:Solyc09g048980.2.1	EnsemblPlantsGene:Solyc09g048980.2	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	PFAM:PF03000	PFscan:PS51649	SEG:seg	SUPFAM:SSF54695
UniParc:UPI000276AD30	UniProt:K4CSZ6	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr9:+:34642848..34644606

Molecular Weight (calculated)

59405.8 Da

IEP (calculated)

5.322

GRAVY (calculated)

-0.160

Length

528 amino acids

Sequence
(BLAST)

001: MVADAKDPNL SELDLTHVPG GPETFELAAK FCYGINFEIT TTNVARLRCV AEYLEMKQDY REENLIARTE TFLVEVVFPN IEKSVEVLSS CEDLLPTAEE
101: VGISDRCIDA IATNACQEQL VSSLSRLDCD SGSLEHKEWW VEDLSVLSID FYGRVIMAMG HVGLHIDSII ASLMHYVQVS LKGIGKPQIW NPARAYPCKG
201: EKGQKTIVET LVSLLPPERS SSVPLNFLFG MLRIAIMVDA VLACRLEIER RIAFRLEMVL LDDLLVPSLQ TGDSLFDVDT VKRILIHFLQ RIDQEENGDC
301: GYESENLDSP SHGSLLKVGR LIDTYLAEIA PDPYLSLEKF IAMISVLPDY ARVIDDGLYR AIDIYLKAHP MLNEHECKKL CKFIDCQKLS QEACNHAAQN
401: DRLPVQMTVQ VLYFEQLRLK NALCGSCGDT QKMSSGVTSA AMSPRDTYAS LRRENRELKL EISRMRVRLS DLEKEQVFMK QGMIDKTGQG KTFLTSLSRG
501: IGRFGIFGEG KRRKSEGKTA RSRRYSDS

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.