Factsheet for Solyc10g049660.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013928	Potato	cytosol	95.42	95.57
Solyc01g107180.2.1	Tomato	cytosol	76.1	74.28
VIT_03s0091g00680.t01	Wine grape	cytosol	68.58	67.15
KRH35678	Soybean	cytosol	66.45	65.06
KRG91101	Soybean	mitochondrion	63.5	61.59
CDY37223	Canola	cytosol	58.76	59.54
CDY50369	Canola	cytosol	49.92	59.45
CDX81462	Canola	cytosol	58.59	59.37
Bra039820.1-P	Field mustard	cytosol	60.23	58.69
Solyc02g092480.2.1	Tomato	cytosol	59.57	57.96
AT2G14820.2	Thale cress	cytosol	59.9	57.73
GSMUA_Achr4P10900_001	Banana	cytosol	51.23	56.19
GSMUA_Achr5P01710_001	Banana	cytosol	52.54	55.25
OQU93039	Sorghum	cytosol	54.66	54.84
TraesCS4B01G078900.3	Wheat	cytosol	56.79	54.73
Solyc03g044090.2.1	Tomato	cytosol	56.3	54.6
TraesCS4A01G236100.1	Wheat	cytosol	56.63	54.57
EER91236	Sorghum	cytosol	56.46	54.5
GSMUA_Achr10P...	Banana	cytosol	50.57	54.31
TraesCS4D01G077700.3	Wheat	cytosol	56.14	54.1
Os12t0583500-01	Rice	cytosol, plasma membrane	56.14	53.76
Os03t0609800-02	Rice	cytosol	55.48	53.47
Os03t0205700-01	Rice	cytosol	52.86	53.39
Zm00001d033344_P001	Maize	cytosol	55.32	53.23
GSMUA_Achr7P26250_001	Banana	cytosol	54.34	53.21
Zm00001d013741_P001	Maize	cytosol	55.65	52.88
TraesCS4B01G256600.1	Wheat	cytosol	52.21	52.73
TraesCS4D01G256700.1	Wheat	cytosol	52.21	52.64
HORVU4Hr1G069760.10	Barley	cytosol	52.7	52.61
TraesCS4A01G048200.1	Wheat	cytosol	52.05	52.48
TraesCS5B01G076500.1	Wheat	cytosol	53.19	52.33
Zm00001d048138_P007	Maize	cytosol	53.03	51.92
TraesCS5A01G070700.1	Wheat	cytosol	52.54	51.61
TraesCS5D01G082800.1	Wheat	cytosol	52.37	51.45
OQU79444	Sorghum	cytosol	53.68	50.93
HORVU5Hr1G018480.1	Barley	cytosol	52.21	50.63
Zm00001d030864_P001	Maize	cytosol	53.03	50.55
GSMUA_Achr2P13430_001	Banana	cytosol	52.54	47.84
Solyc08g006870.2.1	Tomato	cytosol	46.48	46.18
Solyc05g013570.2.1	Tomato	nucleus	42.06	42.13
Zm00001d028075_P010	Maize	endoplasmic reticulum	52.54	39.78
Solyc02g021640.2.1	Tomato	nucleus	34.04	33.07
Solyc10g047530.1.1	Tomato	cytosol	36.17	32.79
Solyc01g105680.2.1	Tomato	nucleus	35.68	32.59
Solyc09g061250.2.1	Tomato	cytosol	31.1	31.3
Solyc02g092560.2.1	Tomato	cytosol, nucleus	29.95	30.7
Solyc09g048980.2.1	Tomato	cytosol	26.51	30.68
Solyc09g007820.1.1	Tomato	cytosol	29.62	30.32
Solyc02g090070.2.1	Tomato	nucleus	32.24	30.26
Solyc05g051580.2.1	Tomato	cytosol	29.79	29.17
Solyc07g043130.2.1	Tomato	cytosol	26.84	28.47
Solyc02g064720.2.1	Tomato	cytosol	27.99	28.26
Solyc09g074630.2.1	Tomato	cytosol	23.57	28.18
Solyc01g098820.2.1	Tomato	cytosol, extracellular	25.37	27.98
Solyc11g066730.1.1	Tomato	cytosol	28.15	27.26

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY2	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628
GO:GO:0009958	InterPro:IPR000210	InterPro:IPR027356	UniProt:K4D0C3	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	EnsemblPlantsGene:Solyc10g049660.1	EnsemblPlants:Solyc10g049660.1.1	UniParc:UPI000276A095	SEG:seg

Description

No Description!

Coordinates

chr10:-:46334967..46337906

Molecular Weight (calculated)

67765.1 Da

IEP (calculated)

8.396

GRAVY (calculated)

-0.310

Length

611 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DTFQSDGKNI RYAASELDSD IVVSVGDVKF HLHKFPLLSK SARLQKMVTN SSEGGSDEVH IHDVPGGPTA FEMCVKFCYG MTVTLNAYNV
101: IAARCAAEYL GMDETVEKGN LIYKIDVFLH STIFRSWKDS IIFLQTTKSR LPLSEEVKLI SHCTDAIASK TSIDVHKVDW SYTYNRTKIP EENGNGPNSN
201: GLRSRVVPND WWVDDLCELE IDLYKRVMVN IKNKGIVSSE VIGESIKAYT LRRFPGFRKG VCQFSDVSRS RSILDTVVCL LPAEKGSVSC SFLLKLLKAS
301: ISVDSGEKVK AELVKRIGQQ LEEASVNALL IRATDGEATM YDVHVFHKIL ENFVMHNEDL KTQSEDGNEI PGVLSEASKL MVAKLVDGYL TEIAKDRNLP
401: LAIFVGLAEM VTDFPRPSHD SLYRAIDIYL KEHPGISKND RKRICCLMDC KKLSVDACTH AVQNDRLPSR VVVQVLFFEQ VRANASSGSS TPDLPKAIRD
501: LTSASYGSSR SAITNTENSE VTASAEELRA LKEELAALRL ANGGLNGDTK RHVDKATNGR MKSILSSKKI FTKIWSSKGR RKQGENSGSD SPDSLEEAKY
601: TPSRKGRYSV S

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.