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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400064174 Potato cytosol 97.93 97.93
Solyc03g044090.2.1 Tomato cytosol 75.0 74.76
VIT_07s0129g00250.t01 Wine grape cytosol 73.89 73.77
KRH58085 Soybean cytosol 67.99 68.43
KRH04439 Soybean cytosol 68.47 68.36
KRH58082 Soybean cytosol 66.24 66.24
KRH04442 Soybean cytosol 65.76 65.56
Solyc01g107180.2.1 Tomato cytosol 64.33 64.54
CDX81314 Canola cytosol 53.82 64.26
Bra037846.1-P Field mustard cytosol 52.55 62.74
CDY18660 Canola cytosol 52.71 62.69
Bra032187.1-P Field mustard cytosol 46.97 61.59
CDX89539 Canola cytosol 46.82 61.38
AT2G23050.1 Thale cress cytosol 46.97 61.33
CDY38923 Canola cytosol 46.34 61.13
Bra012166.1-P Field mustard cytosol 53.98 60.21
EER91236 Sorghum cytosol 60.67 60.19
CDY69095 Canola cytosol 53.66 60.07
AT4G37590.1 Thale cress cytosol 55.41 60.0
Bra010603.1-P Field mustard cytosol 54.94 60.0
CDY22422 Canola cytosol 54.94 60.0
AT5G67440.1 Thale cress cytosol 55.25 59.93
CDY44035 Canola cytosol 54.78 59.83
TraesCS4B01G078900.3 Wheat cytosol 60.35 59.78
TraesCS4A01G236100.1 Wheat cytosol 60.19 59.62
Solyc10g049660.1.1 Tomato cytosol 57.96 59.57
CDY12846 Canola cytosol 53.5 59.47
CDX72639 Canola cytosol 54.62 59.34
CDY29566 Canola cytosol 54.62 59.34
Bra017837.1-P Field mustard cytosol 54.46 59.17
Zm00001d033344_P001 Maize cytosol 59.71 59.06
TraesCS4D01G077700.3 Wheat cytosol 59.39 58.83
GSMUA_Achr5P01710_001 Banana cytosol 54.14 58.52
Os03t0609800-02 Rice cytosol 59.08 58.52
GSMUA_Achr4P10900_001 Banana cytosol 50.96 57.45
Os12t0583500-01 Rice cytosol, plasma membrane 58.28 57.37
Zm00001d013741_P001 Maize cytosol 58.6 57.23
TraesCS5B01G076500.1 Wheat cytosol 56.05 56.68
TraesCS5A01G070700.1 Wheat cytosol 55.89 56.43
TraesCS5D01G082800.1 Wheat cytosol 55.73 56.27
Os03t0205700-01 Rice cytosol 54.14 56.2
TraesCS4B01G256600.1 Wheat cytosol 53.82 55.87
TraesCS4D01G256700.1 Wheat cytosol 53.82 55.78
OQU93039 Sorghum cytosol 53.98 55.66
TraesCS4A01G048200.1 Wheat cytosol 53.66 55.61
HORVU5Hr1G018480.1 Barley cytosol 55.57 55.4
HORVU4Hr1G069760.10 Barley cytosol 53.5 54.9
GSMUA_Achr10P... Banana cytosol 49.36 54.48
OQU79444 Sorghum cytosol 55.73 54.35
Zm00001d048138_P007 Maize cytosol 53.18 53.53
GSMUA_Achr7P26250_001 Banana cytosol 53.03 53.37
GSMUA_Achr2P13430_001 Banana cytosol 56.85 53.2
Zm00001d030864_P001 Maize cytosol 53.18 52.11
Solyc08g006870.2.1 Tomato cytosol 47.29 48.29
Solyc05g013570.2.1 Tomato nucleus 41.72 42.95
Zm00001d028075_P010 Maize endoplasmic reticulum 52.87 41.14
Solyc10g047530.1.1 Tomato cytosol 39.01 36.35
Solyc02g021640.2.1 Tomato nucleus 35.83 35.77
Solyc01g105680.2.1 Tomato nucleus 37.58 35.28
Solyc09g007820.1.1 Tomato cytosol 32.64 34.34
Solyc09g061250.2.1 Tomato cytosol 31.69 32.78
Solyc02g090070.2.1 Tomato nucleus 32.64 31.49
Solyc02g092560.2.1 Tomato cytosol, nucleus 29.3 30.87
Solyc09g074630.2.1 Tomato cytosol 24.84 30.53
Solyc09g048980.2.1 Tomato cytosol 25.64 30.49
Solyc05g051580.2.1 Tomato cytosol 28.98 29.17
Solyc07g043130.2.1 Tomato cytosol 26.43 28.82
Solyc11g066730.1.1 Tomato cytosol 28.34 28.21
Solyc01g098820.2.1 Tomato cytosol, extracellular 24.68 27.98
Solyc02g064720.2.1 Tomato cytosol 26.91 27.93
Protein Annotations
EnsemblPlants:Solyc02g092480.2.1EnsemblPlantsGene:Solyc02g092480.2Gene3D:3.30.710.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:BTB/POZ_domInterPro:IPR000210InterPro:IPR027356InterPro:NPH3_domInterPro:SKP1/BTB/POZ_sfPANTHER:PTHR32370
PANTHER:PTHR32370:SF26PFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649SEG:seg
SUPFAM:SSF54695UniParc:UPI0002767F59UniProt:K4BD44MapMan:35.1::
Description
No Description!
Coordinates
chr2:+:53533510..53537536
Molecular Weight (calculated)
70307.9 Da
IEP (calculated)
7.446
GRAVY (calculated)
-0.396
Length
628 amino acids
Sequence
(BLAST)
001: MKFMKLGSKP DQFQTKGDNI RYVATELATD MVINVGDVKF YLHKFPLLSK SFRLQKLTAN TNEENNDEIN IDDIPGGPAA FEICAKFCYG MTVTLNAYNV
101: VVARCAAEYL EMYETVEKGN IIYKLEVFLK SSIFRSWKDS IIVLQTTKAF LPWSEELKIV SHCLDSVASK AYIDTSKVDW SYTYNRKKLP SENGSDPLWN
201: GVQKQQYVPR DWWVEDLSEL HIDLYKRVIT TIKTKGGMSP EVIGEALRAY AYRRLPGFSK GKIPGSDPVK YQYLVDMITS LLPTEKHSVS CSFLIRLLQT
301: SVSLECGETV QSELKRRISQ QLDEASVADL LLRAPANETM TYDVDTVLEL VQQFMLQKRS GQSDFPEDNE YQEMYPAFAS DSSKVKVARV IDGYLAEVSR
401: DPNLPLAKFV NLAEMVSGFP RPSHDGIYRA IDMYLKEHPG ITKSERKRIC KLMDCRKLSA EACMHAVQNE RLPLRVVVQV LFFEQARATT SSGGGSTPDL
501: AGTIKSLLPG ESHGSSRSAT TNTDEDWDAV PTAEELKALK GELATLRLRD KEAGCNDTNS IDIKMSVEKV IGGKAKGLIM SKKLFSKLWS NKDRLSENSS
601: SDTSESPGSS NAGESKSTPS RSRRHSLS
Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)
001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS
Arabidopsis Description
NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.