Factsheet for Solyc09g007820.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
plasma membrane 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400093531	Potato	cytosol	86.26	95.72
VIT_08s0040g01800.t01	Wine grape	cytosol	66.83	63.94
CDY10395	Canola	cytosol	56.62	62.25
CDY72506	Canola	cytosol	13.23	62.2
KRH21111	Soybean	cytosol	63.65	62.19
KRH32482	Soybean	cytosol	60.8	61.63
KRH19874	Soybean	cytosol	60.64	61.46
AT5G03250.1	Thale cress	cytosol	60.8	61.32
CDX70320	Canola	cytosol	58.29	60.84
CDX80858	Canola	cytosol	58.12	59.01
Bra005737.1-P	Field mustard	cytosol	57.96	58.84
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	49.08	58.02
CDY11245	Canola	cytosol	57.96	57.86
GSMUA_AchrUn_...	Banana	cytosol	40.37	56.71
GSMUA_Achr2P02890_001	Banana	cytosol	52.09	55.14
Solyc02g021640.2.1	Tomato	nucleus	57.45	54.53
Zm00001d043271_P001	Maize	cytosol	55.78	51.47
HORVU3Hr1G076740.1	Barley	cytosol	55.11	51.17
Os01t0780600-01	Rice	plasma membrane	55.95	50.68
EES03716	Sorghum	cytosol	55.11	50.54
TraesCS3B01G349200.1	Wheat	cytosol	54.44	50.23
TraesCS3A01G317300.1	Wheat	cytosol	53.77	49.46
TraesCS3D01G314000.1	Wheat	cytosol	53.77	49.23
Os04t0636500-01	Rice	plasma membrane	50.75	47.05
Zm00001d002146_P001	Maize	cytosol	47.91	46.13
EES11510	Sorghum	cytosol	47.4	44.5
TraesCS2B01G557300.2	Wheat	cytosol	46.73	43.12
TraesCS2D01G529600.1	Wheat	cytosol	46.4	42.62
TraesCS2A01G526900.1	Wheat	cytosol	45.9	42.02
Solyc02g090070.2.1	Tomato	nucleus	42.55	39.02
Solyc11g066730.1.1	Tomato	cytosol	39.2	37.08
Solyc09g061250.2.1	Tomato	cytosol	36.85	36.24
Solyc10g047530.1.1	Tomato	cytosol	38.69	34.27
Solyc02g092560.2.1	Tomato	cytosol, nucleus	34.0	34.06
Solyc01g105680.2.1	Tomato	nucleus	37.86	33.78
Solyc09g048980.2.1	Tomato	cytosol	29.65	33.52
Solyc08g006870.2.1	Tomato	cytosol	33.84	32.85
Solyc02g092480.2.1	Tomato	cytosol	34.34	32.64
Solyc09g074630.2.1	Tomato	cytosol	27.47	32.09
Solyc03g044090.2.1	Tomato	cytosol	33.67	31.9
Solyc05g013570.2.1	Tomato	nucleus	32.33	31.64
Solyc07g043130.2.1	Tomato	cytosol	30.15	31.25
Solyc01g107180.2.1	Tomato	cytosol	32.66	31.15
Solyc02g064720.2.1	Tomato	cytosol	31.16	30.74
Solyc05g051580.2.1	Tomato	cytosol	31.49	30.13
Solyc10g049660.1.1	Tomato	cytosol	30.32	29.62
Solyc01g098820.2.1	Tomato	cytosol, extracellular	26.47	28.52

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	UniProt:K4CQH1	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF41	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	EnsemblPlantsGene:Solyc09g007820.1	EnsemblPlants:Solyc09g007820.1.1	UniParc:UPI000276BAFB	SEG:seg

Description

No Description!

Coordinates

chr9:+:1348239..1351133

Molecular Weight (calculated)

67232.6 Da

IEP (calculated)

5.099

GRAVY (calculated)

-0.228

Length

597 amino acids

Sequence
(BLAST)

001: MALLKLGSKS EAFCCEGQAW RCKSGLPSDI TIEIGEMSFY LHKFPLLSRS GLLEKLMNES RKDDDISLCV IQLSEIPGGA KAFELVAKFC YGVRFELTPL
101: NVVALRCASE YLQMTDEYGE ENLVSQTESF LNDVFSNWTD TIKALETCEE VLSYAEELHI VSRCINSLAM KACSDSKLVN WPVMENGNDS GDVWNGISTG
201: SKTQPMMTDD WWYEDVSFLS LPLYKRLIQA VEAGGMRAGN ISGALVFYAK KYVPLMNRQS SFKDVTHAKS GSTPSEADQR ALLEEIVELL PKQKGVTETR
301: FLLRLLRTAM MLQASPSCRV NLEGRVGLQL DQAILDDLLI PNIGYTVETL YDIDCFQRIL DHFLLIDQAS AAVSPCIMEE NQLIEGTQSL ASITRVANLV
401: DSYLAEVAPD VNFKFPKFQT LASAIPEYAR PVSDGIYRAI DIYLKAHPWL TDIEREQICR LMNCQKLSLE ASTHAAQNER LPLRVIVQVL FFEQLRLRTS
501: ISGWFFVSEN LENSQNVSGA IGQHGDNGTR GRGRSVEDMR ERVSELEKEC NNMKEEFQKM VKTKRRWSIF FRRKSQCNSK SGKPSEDATS QNVPSKV

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.