CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002146_P001	Maize	cytosol	86.95	89.19
Os04t0636500-01	Rice	plasma membrane	68.87	68.01
TraesCS2B01G557300.2	Wheat	cytosol	63.68	62.6
TraesCS2D01G529600.1	Wheat	cytosol	63.68	62.31
TraesCS2A01G526900.1	Wheat	cytosol	63.36	61.81
GSMUA_AchrUn_...	Banana	cytosol	36.01	53.88
CDX70320	Canola	cytosol	45.13	50.17
CDY10395	Canola	cytosol	42.45	49.72
VIT_08s0040g01800.t01	Wine grape	cytosol	48.74	49.68
AT5G03250.1	Thale cress	cytosol	45.91	49.32
VIT_13s0019g04420.t01	Wine grape	cytosol	47.96	49.27
KRH19874	Soybean	cytosol	45.28	48.9
CDX80858	Canola	cytosol	44.5	48.13
Bra005737.1-P	Field mustard	cytosol	44.5	48.13
KRH32482	Soybean	cytosol	44.34	47.88
KRH21111	Soybean	cytosol	45.91	47.79
Solyc09g007820.1.1	Tomato	cytosol	44.5	47.4
PGSC0003DMT400093531	Potato	cytosol	40.09	47.4
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	45.28	47.21
CDY11245	Canola	cytosol	44.34	47.16
EES03716	Sorghum	cytosol	47.48	46.39
EER91175	Sorghum	cytosol	45.75	46.12
CDX85639	Canola	cytosol	41.35	45.98
AT5G13600.1	Thale cress	cytosol	42.3	45.52
KRH34860	Soybean	cytosol	43.71	44.98
KRG91918	Soybean	cytosol	43.4	44.73
Bra008815.1-P	Field mustard	cytosol	42.61	44.65
CDX69627	Canola	cytosol	42.3	44.32
CDY09812	Canola	cytosol	41.67	43.59
EES14497	Sorghum	cytosol	44.5	43.01
Bra023423.1-P	Field mustard	cytosol	33.65	38.77
OQU91026	Sorghum	cytosol, nucleus, plastid	34.12	36.29
CDY72506	Canola	cytosol	7.23	36.22
EER93390	Sorghum	cytosol	36.48	34.32
EER91236	Sorghum	cytosol	32.08	32.23
EES16593	Sorghum	plastid	32.55	32.14
OQU93039	Sorghum	cytosol	30.35	31.69
KXG25806	Sorghum	cytosol	32.08	31.19
EER98911	Sorghum	cytosol	30.19	31.02
EES05363	Sorghum	cytosol, nucleus, plastid	30.97	30.64
KXG39906	Sorghum	cytosol	29.4	30.41
KXG35200	Sorghum	cytosol	27.36	30.1
EES07014	Sorghum	nucleus	36.48	30.01
OQU79444	Sorghum	cytosol	30.35	29.97
EER89339	Sorghum	cytosol	29.87	29.92
EES10995	Sorghum	mitochondrion	30.35	29.51
OQU92601	Sorghum	plastid	30.66	29.5
OQU82741	Sorghum	plastid	24.06	25.42
KXG22914	Sorghum	plastid	25.0	22.27

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8068445	InterPro:BTB/POZ_dom	UniProt:C5YGR8	EnsemblPlants:EES11510
ProteinID:EES11510	ProteinID:EES11510.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF77	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3006G232700	SUPFAM:SSF54695
UniParc:UPI0001A86DC6	RefSeq:XP_002447182.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:57505272..57508428

Molecular Weight (calculated)

68868.3 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.216

Length

636 amino acids

Sequence
(BLAST)

001: MAAATRVIGS KPSDCFQFQD PSTWTCITEL ASDVVVQVGD TSFHLHKTQL ISHSGTLKKL VNESTGDDDS KPCTVRLDDV PGGAEAFLLA VRFCYDVETE
101: LNAGNVVPLR CAAEHLAMTE DYGEGNLVQQ AESFLSEMLA GWDDTVRALN ACDDAVLPAA EDLLIVPRCI DSLADKACAD PTLTGWPMLQ YFTAKSLEET
201: AIWDGIGAAG RPPSPGPDWW YEQASSFGLP VYKRLIAAVR SRGMSPENVA GSLMHYARRH LSGVRRRGDN SDGSSRGRAG ASGTAAVFSA GDQRTLLEEI
301: VALLPVEKSV TPTRFLLGLL RVATVLHAAA ACRDALERRA GNQLEEAALE DLLIPNTGYS AETLYDVDSV QRMLEQFMVT TPPAFAASPE TTDEGQLVDA
401: PPAELRPVCS VAKLVDGYLA EVGTDANLKP SKFQTIAALV PDYARAIDDG LYRAIDIYLK AHPWLTDSER EQLCRLMNCQ KLSLEACTHA AQNERLPLRV
501: VVQVLFFEQL RLRTTVSGWF FASDNADQGS SSDNCVLQRR RSDNDLDFVA AGSLSEVTTE EDGFAAARHD EPSSPAMSVA EIHRPGKGKP KTKSALSRLL
601: GRLGLCGRSS SSRQQLQPPP LPGASGKRRK SFDFGC

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.