CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	95.88	96.18
HORVU5Hr1G093120.2	Barley	cytosol	85.1	84.7
TraesCS5D01G385100.1	Wheat	plastid	85.26	84.59
TraesCS5A01G375500.3	Wheat	peroxisome	81.93	80.28
TraesCS5B01G377600.1	Wheat	cytosol	85.1	79.2
VIT_10s0003g04490.t01	Wine grape	cytosol	73.38	73.26
GSMUA_Achr4P31620_001	Banana	cytosol	67.04	70.85
GSMUA_Achr6P30010_001	Banana	cytosol	61.49	70.8
GSMUA_Achr5P02440_001	Banana	cytosol	64.03	70.51
KRH12771	Soybean	cytosol	71.47	70.14
Solyc02g021640.2.1	Tomato	nucleus	69.89	70.11
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	69.89	70.11
KRH37734	Soybean	cytosol	71.32	69.98
GSMUA_Achr9P26110_001	Banana	cytosol	65.61	68.32
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	67.83	64.36
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	67.35	64.3
CDY02293	Canola	cytosol, mitochondrion, nucleus	67.04	64.19
CDY09586	Canola	cytosol	66.72	64.18
CDX90249	Canola	cytosol, mitochondrion, nucleus	63.87	63.87
CDY27653	Canola	cytosol	58.8	60.03
EES14497	Sorghum	cytosol	61.97	59.42
CDX99692	Canola	cytosol, mitochondrion, nucleus	60.06	58.76
Bra025440.1-P	Field mustard	cytosol	53.25	58.64
EES03716	Sorghum	cytosol	52.14	50.54
EES11510	Sorghum	cytosol	46.12	45.75
OQU91026	Sorghum	cytosol, nucleus, plastid	39.78	41.97
EER93390	Sorghum	cytosol	43.74	40.83
EER91236	Sorghum	cytosol	35.97	35.86
EES16593	Sorghum	plastid	35.34	34.63
OQU93039	Sorghum	cytosol	32.17	33.33
EER98911	Sorghum	cytosol	32.01	32.63
EER89339	Sorghum	cytosol	32.81	32.6
KXG25806	Sorghum	cytosol	33.6	32.42
OQU79444	Sorghum	cytosol	32.96	32.3
OQU92601	Sorghum	plastid	33.44	31.92
EES07014	Sorghum	nucleus	38.03	31.05
KXG39906	Sorghum	cytosol	29.95	30.73
EES05363	Sorghum	cytosol, nucleus, plastid	30.27	29.7
KXG35200	Sorghum	cytosol	27.1	29.58
EES10995	Sorghum	mitochondrion	29.48	28.44
CDY12056	Canola	plasma membrane	64.66	25.28
OQU82741	Sorghum	plastid	23.45	24.58
KXG22914	Sorghum	plastid	25.52	22.55

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8062214	InterPro:BTB/POZ_dom	UniProt:C5WR83	ncoils:Coil
EnsemblPlants:EER91175	ProteinID:EER91175	ProteinID:EER91175.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3001G157100
SUPFAM:SSF54695	unigene:Sbi.1491	UniParc:UPI0001A820AE	RefSeq:XP_002464177.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:12696653..12702088

Molecular Weight (calculated)

69738.2 Da

IEP (calculated)

6.775

GRAVY (calculated)

-0.194

Length

631 amino acids

Sequence
(BLAST)

001: MASVKLGSKP DAFKRQGQAW FCTTGLPSDV TVEVGDMSFH LHKFPLLSKS AFLERLIEEN SDQEECIVKL NEIPGGAKSF ELVARFCYGV KIELSPANVV
101: YLRCASEHLE MTEAVAEENL IAQSEMFLNQ VVLRNWKDSL TALETCDDLL PHAEDLQIVK RCIESLASKA TTDPNLFGWP IREHGMMQSP GGSVLWNGIS
201: TGARPRNFNS DWWYGDASSL SFPMYKRLIS TMESRGIRPE IIAGSLTYYA KKYLPGLNRR HSHSMGAVAT TSTLSEVEQK NLLEEIDRLL PVHKGVASTK
301: VLLGLLRTAM ILKASPTCIS NLEKRIGMQL DQATLEDLLL PNFSYTMETL YNVECVHRIL DHFLAMDQAN GGESPCLDDV MASPSLAPIT SVAKLIDGYL
401: AEIAPDINLK PPKFQALASA IPEYARPLDD GLYRAIDIYL KAHSWLSEGE REQLCRLLDC QKLSLEACTH AAQNERLPLR VVVQVLFFEQ LQLRTSIAGC
501: LLVSDNLEGS RPLRSGITTS GEAGGWATAV RENQVLKVGM DNMRMRLAEL EKECSSMRQE IEKLGGRAGK GGGGGGWASR VVPRRLGLKV RSQMCSAQEG
601: SVSEQQRSMS AKLDKLQAKV SKQKKQLAVD A

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.