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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • plasma membrane 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005769_P001 Maize cytosol 93.54 92.64
Zm00001d020512_P001 Maize cytosol 95.8 91.37
Os09t0420900-01 Rice cytosol 87.72 87.86
TraesCS5D01G231300.1 Wheat cytosol 85.3 82.89
HORVU5Hr1G064620.1 Barley cytosol 85.3 82.89
TraesCS5B01G222700.2 Wheat cytosol 84.65 82.26
TraesCS5A01G223800.1 Wheat cytosol 84.98 79.34
GSMUA_Achr4P01950_001 Banana cytosol 44.1 66.91
GSMUA_Achr3P04740_001 Banana cytosol 59.94 62.88
VIT_04s0008g06630.t01 Wine grape cytosol 58.0 57.9
KRH15648 Soybean cytosol 57.19 57.56
KRH05372 Soybean cytosol 57.19 57.47
EER89339 Sorghum cytosol 57.35 55.91
Solyc08g006870.2.1 Tomato cytosol 55.41 55.77
PGSC0003DMT400022573 Potato cytosol 55.41 55.77
KRH52322 Soybean cytosol 53.8 54.5
AT4G31820.1 Thale cress cytosol 49.76 53.94
CDX68790 Canola cytosol 49.11 53.15
Bra011301.1-P Field mustard cytosol 48.95 52.51
CDX75198 Canola cytosol 48.95 52.51
KRH61660 Soybean cytosol 52.02 51.03
EER91236 Sorghum cytosol 47.66 46.6
OQU79444 Sorghum cytosol 45.72 43.94
OQU93039 Sorghum cytosol 42.49 43.19
KXG35200 Sorghum cytosol 31.83 34.08
EES05363 Sorghum cytosol, nucleus, plastid 34.09 32.81
EES10995 Sorghum mitochondrion 33.93 32.11
EER91175 Sorghum cytosol 32.63 32.01
EES03716 Sorghum cytosol 32.63 31.03
KXG25806 Sorghum cytosol 32.31 30.58
EES14497 Sorghum cytosol 32.15 30.24
EES11510 Sorghum cytosol 31.02 30.19
EES16593 Sorghum plastid 29.56 28.42
OQU91026 Sorghum cytosol, nucleus, plastid 27.14 28.09
EES07014 Sorghum nucleus 35.06 28.07
EER93390 Sorghum cytosol 30.37 27.81
OQU92601 Sorghum plastid 28.43 26.63
KXG39906 Sorghum cytosol 25.69 25.85
OQU82741 Sorghum plastid 22.78 23.42
KXG22914 Sorghum plastid 23.59 20.45
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1EntrezGene:8062114InterPro:BTB/POZ_NPY1InterPro:BTB/POZ_domUniProt:C5XCW0
EnsemblPlants:EER98911ProteinID:EER98911ProteinID:EER98911.1GO:GO:0003674GO:GO:0004871GO:GO:0005488
GO:GO:0005515GO:GO:0006810GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150
GO:GO:0009987GO:GO:0060918GO:GO:0099402InterPro:IPR000210InterPro:IPR027356InterPro:NPH3_dom
PFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649PANTHER:PTHR32370PANTHER:PTHR32370:SF7
InterPro:SKP1/BTB/POZ_sfEnsemblPlantsGene:SORBI_3002G204300SUPFAM:SSF54695unigene:Sbi.17005UniParc:UPI0001A83FE1RefSeq:XP_002462390.1
Description
hypothetical protein
Coordinates
chr2:-:59561394..59567130
Molecular Weight (calculated)
68950.8 Da
IEP (calculated)
7.854
GRAVY (calculated)
-0.280
Length
619 amino acids
Sequence
(BLAST)
001: MKFMKLGSKP DAFQSDGADV RYVVSDLATD VVVHVGQVKF YLHKFPLLSK SSKLQRLVLK AAEEVTDEVR IDDLPGGAKS FEICAKFCYG MVVTLSPHNV
101: VAARCAAEYL EMTEDMEKGN LIFKIEVFIN SSILRSWKDS IIVLQSTKAL LPWSEELKVV GRCIDAIASK TSVDPANVTW SYSHNSKKGG TCAEIVESAG
201: KPSIAPKDWW VEDLCELDVD LYKRVMVAVK SKGRMSPELI GEALKAYAVR WLPDSYDALV AEDYMRRNQC LVETIIWLLP SDKSSGCSCR FLLKLLKVAI
301: LVGGGEHVKE ELIRRISFQL HKATVKDLLL PSTSPNDGTY DVRLVHNLVQ RFVARTALSH NGGFIEKSDE KMIELNFEQE STLSVGELVD GYLSEVASDQ
401: DLSLSMFVEL ATAVPEVARP VHDNLYYAVD AYLKEHPDIN KSEKKKICSL VDVKKLSTDA SMHATQNDRL PLRLVVQVLF FQQLRAGSSK ELALIDNGEQ
501: ACTRPMEDQC DPCERRIPKH PNSLNKQVTS LSARESQHHR ISEHRGGRNS FKDQIGGILL QSRSRRIFDK LWSSKGQGEH GGKGSETSGS SQSPPLSAKP
601: AEVKPSPLPP LRNRRYSVS
Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)
001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S
Arabidopsis Description
NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.