CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035208_P002	Maize	cytosol	93.62	92.91
Os08t0130600-01	Rice	plasma membrane	82.67	84.87
TraesCS7D01G306400.1	Wheat	cytosol	81.16	83.05
TraesCS7B01G209700.1	Wheat	cytosol	80.55	82.43
HORVU7Hr1G073650.1	Barley	cytosol	80.24	82.37
TraesCS7A01G309700.1	Wheat	cytosol	79.94	81.8
VIT_10s0003g04490.t01	Wine grape	cytosol	63.98	66.61
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	62.77	65.66
Solyc02g021640.2.1	Tomato	nucleus	62.61	65.5
KRH12771	Soybean	cytosol	62.92	64.39
KRH37734	Soybean	cytosol	62.46	63.92
EER91175	Sorghum	cytosol	59.42	61.97
CDY09586	Canola	cytosol	58.81	58.99
CDY02293	Canola	cytosol, mitochondrion, nucleus	58.51	58.42
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	58.66	58.4
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	58.66	58.05
CDX90249	Canola	cytosol, mitochondrion, nucleus	55.32	57.69
CDY27653	Canola	cytosol	52.74	56.15
CDX99692	Canola	cytosol, mitochondrion, nucleus	53.95	55.04
Bra025440.1-P	Field mustard	cytosol	46.81	53.75
EES03716	Sorghum	cytosol	48.78	49.31
EES11510	Sorghum	cytosol	43.01	44.5
OQU91026	Sorghum	cytosol, nucleus, plastid	37.39	41.14
EER93390	Sorghum	cytosol	40.12	39.05
EES16593	Sorghum	plastid	34.5	35.25
EER91236	Sorghum	cytosol	33.43	34.76
OQU93039	Sorghum	cytosol	31.46	33.99
OQU79444	Sorghum	cytosol	32.52	33.23
OQU92601	Sorghum	plastid	32.83	32.68
EER89339	Sorghum	cytosol	31.31	32.44
EER98911	Sorghum	cytosol	30.24	32.15
KXG25806	Sorghum	cytosol	31.61	31.8
KXG39906	Sorghum	cytosol	29.48	31.54
EES07014	Sorghum	nucleus	36.78	31.31
KXG35200	Sorghum	cytosol	27.36	31.14
EES05363	Sorghum	cytosol, nucleus, plastid	29.18	29.86
EES10995	Sorghum	mitochondrion	28.12	28.29
OQU82741	Sorghum	plastid	23.86	26.08
CDY12056	Canola	plasma membrane	55.32	22.55
KXG22914	Sorghum	plastid	24.16	22.27

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8074079	ProteinID:AAL73542.1	InterPro:BTB/POZ_dom	ncoils:Coil
EnsemblPlants:EES14497	ProteinID:EES14497	ProteinID:EES14497.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF23	UniProt:Q8W0R6	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
EnsemblPlantsGene:SORBI_3007G029700	SUPFAM:SSF54695	unigene:Sbi.12577	UniParc:UPI00000A10FC	RefSeq:XP_002445002.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:2709378..2714744

Molecular Weight (calculated)

72422.1 Da

IEP (calculated)

6.634

GRAVY (calculated)

-0.250

Length

658 amino acids

Sequence
(BLAST)

001: MACLKLGSRA DVFRKQGQEW YCTSGLPSDI TVVVGEQSFH LHKFPLLSKS GLLEKRIREK IDKGDDSCTI DLSDIPGGAK AFELAAKFCY GVKFEMTASN
101: VVHLRCAADY LEMTEEISEE NLIAQTEYFL TQTVLRSWKD SVKALQTCDN VLEVAERLQI VKRCVDSIAT RSCSDPDLFG WPVAQYGGPM QSPGGSLLWN
201: GISTGARPRN SSPDWWYDDV SCLSLPLYKK LISAMEYRGI SQEIIVGSLN HYAKRRLPGL NRRKSIGDVS NCLSMTSLTS IPSEDDQKYL LEEIDRLLPF
301: QRGVTSCKLL FGLLRTAIFL KASPSCVSNL ERRIGMQLDK ASLEDLLIPN VSDSVETLYD VDCAQRILDH FLAMDQETGG ASPGIGEDGQ MLASPSLMPI
401: MMVAKLIDGY LAEVAPDMNL KLPKFRSLAA AIPDYARPID DGLYRAIDIY LKAHPHLSES EKEELCRVMD CQKLSLEACT HAAQNERLPL RIIVQVLFFE
501: QLQLRSSIAE CLMISEPLDG GGGVGPSRQL GGLPVSGEHH RGAGWPLAAR ENQTLREGMD SMKQRVAELE KECSAMREDI ERLGRSRSAS KSRFPFALTA
601: KPVCSTKDKE AAPESSKSKA KAAATGSEDK LAVVKGGAAT DGAAQPKHRK HKMNLSAC

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.