CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09586	Canola	cytosol	89.38	85.98
CDY02293	Canola	cytosol, mitochondrion, nucleus	89.54	85.74
CDY27653	Canola	cytosol	74.8	76.38
CDX99692	Canola	cytosol, mitochondrion, nucleus	76.07	74.42
VIT_10s0003g04490.t01	Wine grape	cytosol	71.95	71.84
Solyc02g021640.2.1	Tomato	nucleus	71.16	71.38
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	70.68	70.91
KRH12771	Soybean	cytosol	71.63	70.3
KRH37734	Soybean	cytosol	71.32	69.98
EER91175	Sorghum	cytosol	63.87	63.87
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	63.23	63.43
GSMUA_Achr5P02440_001	Banana	cytosol	57.21	63.0
GSMUA_Achr5P00550_001	Banana	cytosol	62.6	62.8
GSMUA_Achr4P31620_001	Banana	cytosol	58.64	61.98
HORVU5Hr1G093120.2	Barley	cytosol	62.12	61.83
GSMUA_Achr6P30010_001	Banana	cytosol	53.41	61.5
TraesCS5D01G385100.1	Wheat	plastid	61.97	61.48
GSMUA_Achr9P26110_001	Banana	cytosol	58.32	60.73
TraesCS5A01G042600.1	Wheat	cytosol	60.22	60.03
TraesCS5D01G051100.1	Wheat	cytosol	60.06	59.97
Os12t0613250-00	Rice	plasma membrane	61.01	59.23
TraesCS5A01G375500.3	Wheat	peroxisome	59.75	58.54
Os08t0130600-01	Rice	plasma membrane	59.43	58.5
TraesCS5B01G377600.1	Wheat	cytosol	62.28	57.96
HORVU7Hr1G073650.1	Barley	cytosol	58.32	57.41
TraesCS7D01G306400.1	Wheat	cytosol	58.32	57.23
TraesCS5B01G046200.2	Wheat	mitochondrion	58.16	57.17
TraesCS7B01G209700.1	Wheat	cytosol	58.16	57.08
TraesCS7A01G309700.1	Wheat	cytosol	57.84	56.77
EES14497	Sorghum	cytosol	57.69	55.32
Zm00001d035208_P002	Maize	cytosol	57.69	54.9
CDY10395	Canola	cytosol	46.28	53.78
CDX70320	Canola	cytosol	47.86	52.8
CDY72506	Canola	cytosol	10.3	51.18
CDX80858	Canola	cytosol	47.39	50.85
CDY11245	Canola	cytosol	47.39	50.0
HORVU5Hr1G010370.2	Barley	plastid	60.06	48.04
CDX85639	Canola	cytosol	43.26	47.73
CDX69627	Canola	cytosol	44.53	46.29
CDY09812	Canola	cytosol	44.37	46.05
CDY45241	Canola	cytosol	40.89	43.14
CDY30765	Canola	cytosol	43.11	42.9
CDX77951	Canola	cytosol	36.45	41.97
CDX73781	Canola	cytosol	36.13	41.83
CDY38923	Canola	cytosol	28.68	38.03
CDY12056	Canola	plasma membrane	96.67	37.79
CDX89539	Canola	cytosol	28.68	37.79
CDY29723	Canola	cytosol	41.52	37.59
CDY20341	Canola	cytosol	41.68	37.04
CDY72267	Canola	cytosol	29.48	36.76
CDY72257	Canola	cytosol	29.32	36.56
CDY68489	Canola	cytosol, plastid	25.99	36.53
CDY44035	Canola	cytosol	32.65	35.83
CDX81314	Canola	cytosol	29.79	35.74
CDY22422	Canola	cytosol	32.33	35.48
CDX85365	Canola	cytosol	34.71	35.32
CDX86278	Canola	cytosol	34.55	35.16
CDY18660	Canola	cytosol	29.32	35.04
CDX72639	Canola	cytosol	32.01	34.95
CDY29566	Canola	cytosol	32.01	34.95
CDY37857	Canola	cytosol	32.96	34.67
CDY18715	Canola	cytosol	39.62	34.53
CDX84515	Canola	cytosol	39.62	34.44
CDY69095	Canola	cytosol	30.11	33.87
CDY00659	Canola	plastid	31.38	33.85
CDY12846	Canola	cytosol	30.27	33.81
CDX73937	Canola	plastid	31.22	33.73
CDX81221	Canola	cytosol	38.83	33.56
CDY57436	Canola	cytosol	32.01	33.5
CDY12841	Canola	cytosol	32.01	33.5
CDX68790	Canola	cytosol	29.79	32.87
CDX89922	Canola	cytosol	32.65	32.7
CDX81462	Canola	cytosol	31.22	32.67
CDY18140	Canola	cytosol	32.49	32.54
CDY37223	Canola	cytosol	31.06	32.5
CDY30615	Canola	cytosol	25.52	32.26
CDY32492	Canola	cytosol	32.49	32.13
CDY02075	Canola	cytosol	29.48	32.07
CDY57361	Canola	cytosol	25.36	32.06
CDX75198	Canola	cytosol	29.32	32.06
CDX84827	Canola	cytosol	28.68	32.04
CDY10743	Canola	cytosol	29.48	32.01
CDY23992	Canola	cytosol	28.53	31.86
CDX83620	Canola	cytosol	27.58	31.81
CDY50369	Canola	cytosol	25.67	31.58
CDY09561	Canola	cytosol	29.95	31.29
CDY13635	Canola	cytosol	28.37	31.18
CDY02305	Canola	cytosol	29.79	30.97
CDY52208	Canola	plastid	31.54	30.8
CDX77798	Canola	cytosol	26.62	29.95
CDY17704	Canola	cytosol	26.62	29.95
CDY37449	Canola	cytosol	22.98	29.84
CDX83030	Canola	plastid	24.72	29.16
CDX69851	Canola	cytosol	28.05	28.1
CDX96986	Canola	cytosol	27.26	27.48
Os12t0613300-02	Rice	nucleus	1.27	2.69

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDX90249	ProteinID:CDX90249	ProteinID:CDX90249.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00150817001	InterPro:IPR000210	InterPro:IPR027356
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EF2D5B	SEG:seg

Description

BnaA08g17350D

Coordinates

chrLK031862:+:913101..915923

Molecular Weight (calculated)

69449.1 Da

IEP (calculated)

6.747

GRAVY (calculated)

-0.336

Length

631 amino acids

Sequence
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERNIAEA SKQGDDDDKC LIQISDLPGG DKTFELIAKF CYGVKLELTA
101: SNVVHLRCAA EHLEMTEDHA EGNLISQTES FLNQVVLKSW KDSIKALQTC SEVSHYAEEL NITKKCIESL AARASTTDPN LLGWPVVDPM HSPGGSVLWN
201: GISTGARLKH TSSDWWYEDA STLSFPLFKR LITVMDSRGG AREDIIAGSL TYYTRKHLPG LKRRRGGPEA SGRFSSSGNV LSEEEQKHLL EEIQDLLSMQ
301: KANLEKRIGM QLDQAALEDL VMPSFTHTME TLYDVDSVQR ILDHFLGTDQ IMTVGGGVGS PCSSVDDGNL MGSPQRITPM TAVAKLVDGY LAEVAPDVNL
401: KLPKFQALAG SVPECARLLD DGLYRAIDIY LKHHPWLAET ERENLCRLLD CQKLSLEACT HAAQNERLPL RVIVQVLFFE QLQLRTSVAG CFLVSDNLDG
501: GSRQLRSGGF AGGSTEGGGG WASAVRENQV LKVGMDSMRM RVCELEKECS NMRQEIEKLG KTSKVGGGGK TWENVSKKLG FGIKLKSHQM CSAQEGSVSK
601: SNSENVKIEK LKDVKERRGK HKKASSISSE R

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.