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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11245 Canola cytosol 99.49 97.83
AT5G03250.1 Thale cress cytosol 91.67 91.05
CDX70320 Canola cytosol 84.35 86.71
CDY72506 Canola cytosol 18.71 86.61
CDY10395 Canola cytosol 79.93 86.56
KRH21111 Soybean cytosol 63.44 61.05
KRH19874 Soybean cytosol 60.37 60.27
KRH32482 Soybean cytosol 60.2 60.1
VIT_08s0040g01800.t01 Wine grape cytosol 63.27 59.62
Solyc09g007820.1.1 Tomato cytosol 59.01 58.12
PGSC0003DMT400045367 Potato cytosol, mitochondrion 60.2 58.03
PGSC0003DMT400093531 Potato cytosol 51.36 56.13
GSMUA_AchrUn_... Banana cytosol 39.12 54.12
GSMUA_Achr2P02890_001 Banana cytosol 51.19 53.37
CDX85639 Canola cytosol 50.68 52.1
GSMUA_Achr9P19480_001 Banana extracellular, plasma membrane 44.56 51.88
Zm00001d043271_P001 Maize cytosol 54.59 49.61
CDX69627 Canola cytosol 51.19 49.59
TraesCS3B01G349200.1 Wheat cytosol 54.08 49.15
Os01t0780600-01 Rice plasma membrane 54.76 48.86
HORVU3Hr1G076740.1 Barley cytosol 53.23 48.68
TraesCS3A01G317300.1 Wheat cytosol 53.57 48.54
CDY09812 Canola cytosol 50.17 48.52
EES03716 Sorghum cytosol 53.57 48.39
TraesCS3D01G314000.1 Wheat cytosol 53.57 48.31
CDX90249 Canola cytosol, mitochondrion, nucleus 50.85 47.39
Zm00001d002146_P001 Maize cytosol 49.15 46.61
Os04t0636500-01 Rice plasma membrane 51.02 46.58
CDY09586 Canola cytosol 50.85 45.58
CDY02293 Canola cytosol, mitochondrion, nucleus 51.02 45.52
CDY27653 Canola cytosol 47.45 45.15
TraesCS2B01G557300.2 Wheat cytosol 49.66 45.13
TraesCS2A01G526900.1 Wheat cytosol 49.49 44.63
TraesCS2D01G529600.1 Wheat cytosol 49.32 44.62
EES11510 Sorghum cytosol 48.13 44.5
CDX99692 Canola cytosol, mitochondrion, nucleus 47.96 43.72
CDY45241 Canola cytosol 38.78 38.13
CDX77951 Canola cytosol 35.2 37.77
CDY72267 Canola cytosol 32.14 37.35
CDY30765 Canola cytosol 40.14 37.22
CDY72257 Canola cytosol 31.97 37.15
CDY38923 Canola cytosol 29.93 36.97
CDX89539 Canola cytosol 29.93 36.74
CDX73781 Canola cytosol 33.84 36.51
CDY68489 Canola cytosol, plastid 27.38 35.86
CDX81314 Canola cytosol 31.97 35.74
CDY18660 Canola cytosol 31.97 35.61
CDY69095 Canola cytosol 33.16 34.76
CDX83620 Canola cytosol 32.14 34.55
CDY12846 Canola cytosol 33.16 34.51
CDY13635 Canola cytosol 33.16 33.97
CDY29723 Canola cytosol 40.14 33.86
CDY20341 Canola cytosol 40.31 33.38
CDY29566 Canola cytosol 32.65 33.22
CDX72639 Canola cytosol 32.48 33.05
CDY22422 Canola cytosol 32.31 33.04
CDX75198 Canola cytosol 32.31 32.93
CDY44035 Canola cytosol 32.14 32.87
CDX68790 Canola cytosol 31.97 32.87
CDY57436 Canola cytosol 33.5 32.67
CDX85365 Canola cytosol 33.84 32.1
CDX86278 Canola cytosol 33.84 32.1
CDX73937 Canola plastid 31.63 31.85
CDY12841 Canola cytosol 32.65 31.84
CDY37857 Canola cytosol 32.48 31.83
CDY00659 Canola plastid 31.63 31.79
CDY30615 Canola cytosol 26.87 31.66
CDY57361 Canola cytosol 26.53 31.26
CDY10743 Canola cytosol 30.78 31.15
CDX84827 Canola cytosol 29.93 31.15
CDY23992 Canola cytosol 29.76 30.97
CDY52208 Canola plastid 34.01 30.96
CDX89922 Canola cytosol 33.16 30.95
CDX81462 Canola cytosol 31.63 30.85
CDY18140 Canola cytosol 32.99 30.79
CDY02075 Canola cytosol 30.27 30.69
CDY37223 Canola cytosol 31.46 30.68
CDX84515 Canola cytosol 37.76 30.58
CDY18715 Canola cytosol 37.59 30.52
CDY32492 Canola cytosol 32.99 30.41
CDY02305 Canola cytosol 31.12 30.15
CDY37449 Canola cytosol 24.83 30.04
CDX81221 Canola cytosol 37.07 29.86
CDY09561 Canola cytosol 30.61 29.8
CDX69851 Canola cytosol 31.29 29.21
CDX96986 Canola cytosol 30.95 29.07
CDY50369 Canola cytosol 25.34 29.04
CDX77798 Canola cytosol 27.21 28.52
CDY17704 Canola cytosol 27.21 28.52
CDX83030 Canola plastid 25.17 27.66
CDY12056 Canola plasma membrane 50.51 18.4
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1InterPro:BTB/POZ_domEnsemblPlants:CDX80858ProteinID:CDX80858ProteinID:CDX80858.1
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00134255001InterPro:IPR000210
InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649
PANTHER:PTHR32370PANTHER:PTHR32370:SF46InterPro:SKP1/BTB/POZ_sfSMART:SM00225SUPFAM:SSF54695UniPathway:UPA00143
UniParc:UPI0004EAED50SEG:seg::::
Description
BnaC03g01120D
Coordinates
chrLK031823:+:512795..515593
Molecular Weight (calculated)
66088.2 Da
IEP (calculated)
4.990
GRAVY (calculated)
-0.261
Length
588 amino acids
Sequence
(BLAST)
001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLEKLIEES SSDDGSSCVL SLDDIPGGGK TFELITKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEDV TDHAEDLHII SRCVDSLAIK ACADPSLFNW PKNATSGQNT EDESHLWNGI
201: SPSGKMLQPT GEDWWFDDAS FLNLSLFKRL ITAIESRGMK LENISMAVMY YTKKHVPLMN RQVTMDEQVI ETPNTSEAEQ KDALEEIIGL LPTKKGVNPT
301: KFLLRLLQTA MVLHTSQSSR ENLERLIGNQ LEQAALVDLL IPNMGYSETL YDVECVLRMI EQFVSSTEQA GIVPSPCIIE EGHLVKDGAE MLTPPTLVAT
401: LVDGYLAEVA PDVNLKLAKF EAIAAAVPDY ARPLDDGVYH AVDVFLKAHP WITDSEREHI CRLMNCQKLS LEASAHAAQN ERLPLRVIVQ VLFFEQLRLR
501: TSISSWFFVS ENLDNPEHQN GGNGCVLKPR GENVRERVSE LEKECMSMKQ ELQKLVRSKR SWKNFTRKLN FKKKSECCKP KDQEKQAN
Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)
001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI
Arabidopsis Description
BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.