Factsheet for GSMUA_Achr2P02890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	60.28	67.33
GSMUA_AchrUn_...	Banana	cytosol	44.15	58.59
VIT_13s0019g04420.t01	Wine grape	cytosol	60.82	55.41
CDY10395	Canola	cytosol	51.6	53.59
CDX70320	Canola	cytosol	53.37	52.62
KRH19874	Soybean	cytosol	54.79	52.46
KRH32482	Soybean	cytosol	54.79	52.46
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	56.74	52.46
VIT_08s0040g01800.t01	Wine grape	cytosol	57.98	52.4
GSMUA_Achr5P02440_001	Banana	cytosol	53.01	52.18
Solyc09g007820.1.1	Tomato	cytosol	55.14	52.09
GSMUA_Achr6P30010_001	Banana	cytosol	50.53	52.01
PGSC0003DMT400093531	Potato	cytosol	49.29	51.67
KRH21111	Soybean	cytosol	55.5	51.23
CDX80858	Canola	cytosol	53.37	51.19
AT5G03250.1	Thale cress	cytosol	53.72	51.18
Bra005737.1-P	Field mustard	cytosol	53.19	51.02
GSMUA_Achr9P26110_001	Banana	cytosol	54.08	50.33
CDY11245	Canola	cytosol	53.19	50.17
KRH34860	Soybean	cytosol	54.43	49.68
KRG91918	Soybean	cytosol	54.26	49.59
CDX85639	Canola	cytosol	48.94	48.25
AT5G13600.1	Thale cress	cytosol	50.53	48.22
CDY72506	Canola	cytosol	10.82	48.03
GSMUA_Achr5P00550_001	Banana	cytosol	53.55	48.01
GSMUA_Achr4P31620_001	Banana	cytosol	49.65	46.9
Bra008815.1-P	Field mustard	cytosol	48.23	44.81
CDY09812	Canola	cytosol	47.7	44.24
CDX69627	Canola	cytosol	47.52	44.15
Bra023423.1-P	Field mustard	cytosol	41.31	42.21
GSMUA_Achr4P01950_001	Banana	cytosol	29.61	40.93
GSMUA_Achr9P26440_001	Banana	cytosol	41.13	39.86
GSMUA_Achr3P20380_001	Banana	cytosol	38.65	37.91
GSMUA_Achr10P...	Banana	cytosol	36.35	37.07
GSMUA_Achr8P04840_001	Banana	cytosol	37.94	36.39
GSMUA_Achr5P01710_001	Banana	cytosol	37.06	35.97
GSMUA_Achr4P10900_001	Banana	cytosol	35.11	35.55
GSMUA_Achr6P27970_001	Banana	cytosol	31.91	34.82
GSMUA_Achr10P...	Banana	cytosol	33.87	33.93
GSMUA_Achr3P04740_001	Banana	cytosol	35.46	33.9
GSMUA_Achr7P21950_001	Banana	plastid	33.69	33.75
GSMUA_Achr10P...	Banana	cytosol	34.04	33.74
GSMUA_Achr8P30170_001	Banana	plastid	32.98	33.33
GSMUA_Achr8P16390_001	Banana	cytosol	30.67	33.14
GSMUA_Achr7P26250_001	Banana	cytosol	36.35	32.85
GSMUA_Achr1P11260_001	Banana	plastid	32.98	32.46
GSMUA_Achr7P26300_001	Banana	cytosol	33.69	32.09
GSMUA_Achr2P13430_001	Banana	cytosol	37.59	31.59
GSMUA_Achr1P21440_001	Banana	cytosol	33.87	31.41
GSMUA_Achr3P12020_001	Banana	cytosol	28.55	29.49
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	30.85	29.0
GSMUA_Achr11P...	Banana	cytosol, plastid	28.9	28.15
GSMUA_Achr3P14590_001	Banana	cytosol	28.55	28.1
GSMUA_Achr3P25690_001	Banana	nucleus	35.64	16.83

Protein Annotations

EnsemblPlants:GSMUA_Achr2P02890_001	EnsemblPlants:GSMUA_Achr2T02890_001	EnsemblPlantsGene:GSMUA_Achr2G02890_001	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF41	PFAM:PF03000	PFscan:PS51649	SUPFAM:SSF54695
UniParc:UPI0002953FA9	UniProt:M0S4N0	MapMan:35.1	:	:	:

Description

Putative BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr2G02890_001]

Coordinates

chr2:-:8635639..8638874

Molecular Weight (calculated)

62905.2 Da

IEP (calculated)

5.956

GRAVY (calculated)

0.035

Length

564 amino acids

Sequence
(BLAST)

001: MATMKLGSKA EAFQLEGQTW QASFHLTLDV LIEVGEMSFH LHKSFLLQSE MCCWFCHSMC SIRGLIHFVI DLQFPLLNRS GLLGRMISEF RSEDGKACVL
101: HLHDIPGGAK AFELAAKFCY DIKIELNATN VVPVRCAAEH LLMTEDYVGG NLITRTDNFL GEVLSSWKDT IKALEACESV LPHAEGLHIV SRCINSLASK
201: ASLADWWYMD ATFLGLPLFK RLILAMEAKG MKPENVAEAL IYSAKRSLPG LSGGSTTARI TPGSSISAAS ESEQRVFLEE IVDLLPMNKG VISTRFLLRL
301: LRTAMILRAS PSCRENLERR TGAQVEEAAL EDLLIPSLDP SVETLYDVDC VQRILVHFMQ LNQSTVTSPA IVDEGQSITS SSSPAPMTMV ARLVDVYLAE
401: VAADVNLKLH KFLSLASVVS DYARPLDDGI YRAIDVYLKS HPWLTESERE QICQLINCQK LSLEACTHAA QNERLPLRLV VQVLFFEQLH LRTSIAGWFF
501: VSDRENDDHH MDVDDMRSQV LELEKECLSM KQEIEKLGKP RSSWNIFTRK CGFGVKSQSV AGGK

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.