Factsheet for GSMUA_Achr10P15420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0061g01140.t01	Wine grape	cytosol	55.33	52.76
KRH22745	Soybean	cytosol	59.67	52.13
KRH26561	Soybean	cytosol	59.13	51.5
PGSC0003DMT400001154	Potato	cytosol	55.88	48.97
Solyc11g066730.1.1	Tomato	cytosol	55.7	48.81
AT3G44820.1	Thale cress	cytosol	52.44	44.55
Bra037606.1-P	Field mustard	cytosol	50.81	43.84
CDY29723	Canola	cytosol	50.99	40.46
CDY20341	Canola	cytosol	50.99	39.72
GSMUA_AchrUn_...	Banana	cytosol	30.2	39.29
GSMUA_Achr5P02440_001	Banana	cytosol	39.96	38.57
GSMUA_Achr5P00550_001	Banana	cytosol	43.76	38.47
GSMUA_Achr4P31620_001	Banana	cytosol	41.41	38.36
GSMUA_Achr6P30010_001	Banana	cytosol	37.79	38.14
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	34.72	38.02
GSMUA_Achr2P02890_001	Banana	cytosol	37.07	36.35
GSMUA_Achr9P26110_001	Banana	cytosol	39.06	35.64
GSMUA_Achr9P26440_001	Banana	cytosol	35.8	34.02
GSMUA_Achr8P04840_001	Banana	cytosol	35.62	33.5
GSMUA_Achr3P20380_001	Banana	cytosol	33.82	32.52
GSMUA_Achr6P27970_001	Banana	cytosol	29.11	31.14
GSMUA_Achr4P10900_001	Banana	cytosol	31.28	31.06
GSMUA_Achr10P...	Banana	cytosol	31.1	30.55
GSMUA_Achr7P21950_001	Banana	plastid	30.38	29.84
GSMUA_Achr1P21440_001	Banana	cytosol	32.37	29.44
GSMUA_Achr4P01950_001	Banana	cytosol	21.7	29.41
GSMUA_Achr8P16390_001	Banana	cytosol	27.31	28.93
GSMUA_Achr7P26250_001	Banana	cytosol	31.46	27.88
GSMUA_Achr7P26300_001	Banana	cytosol	29.84	27.87
GSMUA_Achr5P01710_001	Banana	cytosol	29.11	27.71
GSMUA_Achr10P...	Banana	cytosol	28.03	27.24
GSMUA_Achr1P11260_001	Banana	plastid	28.03	27.05
GSMUA_Achr8P30170_001	Banana	plastid	27.12	26.88
GSMUA_Achr3P04740_001	Banana	cytosol	28.39	26.61
GSMUA_Achr3P12020_001	Banana	cytosol	25.86	26.19
GSMUA_Achr11P...	Banana	cytosol, plastid	26.76	25.56
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	27.12	25.0
GSMUA_Achr3P14590_001	Banana	cytosol	25.32	24.43
GSMUA_Achr2P13430_001	Banana	cytosol	28.93	23.84
GSMUA_Achr3P25690_001	Banana	nucleus	30.02	13.9

Protein Annotations

EnsemblPlants:GSMUA_Achr10P15420_001	EnsemblPlants:GSMUA_Achr10T15420_001	EnsemblPlantsGene:GSMUA_Achr10G15420_001	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF27	PFAM:PF03000	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002959F25	UniProt:M0RIG8	MapMan:35.1	:

Description

Putative BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr10G15420_001]

Coordinates

chr10:+:23362835..23365979

Molecular Weight (calculated)

62402.1 Da

IEP (calculated)

7.444

GRAVY (calculated)

0.005

Length

553 amino acids

Sequence
(BLAST)

001: MNYRFSKTGI PSDIVIEVEG QMFHLHKFPL LSKCGKIAHI SEVSQNVKEG THHILSGCPG GADAFLLVAK FCYGFKVELS PKNIIMVHSI AEYLEMTEQL
101: DENNLLPEAE RFFHKFVLHS WKDCIVALQS SEGSLPHAES FPIVTKCINA LSRMVCTDLS LFGWPMMMYG SLQSPGGSIL WNGINTGAKI RSSQSDWWFE
201: DISCLGVPMF RRLMEAMYER GVRPVIVAGA LMYYTGRYLR GLDRWMKKQG SRDLAFLTVT PAVVDHKVLL ENIVSLLPQK KGKAYCRFLL GLLRFAIILN
301: VCQQSKETLE RTIGMQLELA TLDGLLIPNF SKSDNLYDTD CVERIIHHFL HSQESGIATF SPSSSVSASP LSSSLNRVIK LIDSYITEVA PDVHLGTEKM
401: LSLLVALPKS CRSQNDGLYR ALDVYLKAHP WLVETEKMQL CSVIDYGKLS VDTCAHASQN ERLPHRIILQ VLYFEQLQLR LSLSHYLDAL DIDSTAAANN
501: VVGHILQRDG WISLIHENQA LKVDMESLMS RVRNLEQEFV IIKQKIGRVN RHQ

Best Arabidopsis Sequence Match ( AT3G44820.1 )
(BLAST)

001: MSPVAKVSEF HREGNDWFCK TGLSSDITVV VDDVKFHLHK FPLVSKCGKL ARMYEDSKST DKQSLWTTVL EEFPGGADNF LIVARFCYGA RVDITSKNLV
101: SIHCAAEYLE MTNEYGEDNL ISQVETFLHK HVLRNWKDCI LALQSSSPVL KSAEKLQMIP KLMNAVSTMV CTDPSLFGWP MMMYGTLQSP GGSILWNGIN
201: TGARMRSSGS DWWYEDISYL SVDLFKRLIK TMETKGIRAE SLAGAMMYYA RKYLPGLGRW QSGTSDSSKS RRRVVSFNLA KASSPSSMPP LDQIALLETI
301: LSLLPEKRGR SFCKFLLGLL RVAFILGVDG NCVKKLEKRI GMQLELATLD NLLILNYSDS ETLYNVDCVE RIVRHFVSSL SSSSSQLPEF SPPSLDPVTS
401: PSPAPLKKVA NLVDSYMAEV ASDVNLKPDK MRSLAAALPE SSRPLYDGLY RAFDIYFKEH PWLSDRDKEQ LCNIMDYQRL SIDACAHASH NDRLPLRVVL
501: QVLFFEQMHL RTALAGGLNV ANTETAHAVT IPGGRTGQEI VQRDGWVTVV RQNQVLKVDM QKMRSRVGEL EEEFQSIKQE MKKRVSKSSS SMSSPRLVKL
601: GCKFLLPRAS DAKNDTVQNS VSSTPRSATA DHTLPRSSRH SKHRKSFSFF G

Arabidopsis Description

BTB/POZ domain-containing protein At3g44820 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.