Factsheet for GSMUA_Achr5P00550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g04490.t01	Wine grape	cytosol	72.66	72.31
Solyc02g021640.2.1	Tomato	nucleus	70.59	70.59
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	70.43	70.43
GSMUA_Achr5P02440_001	Banana	cytosol	62.8	68.94
KRH12771	Soybean	cytosol	69.63	68.12
KRH37734	Soybean	cytosol	69.32	67.81
GSMUA_Achr6P30010_001	Banana	cytosol	58.98	67.7
GSMUA_Achr4P31620_001	Banana	cytosol	63.59	67.0
GSMUA_Achr9P26110_001	Banana	cytosol	63.27	65.68
CDX90249	Canola	cytosol, mitochondrion, nucleus	62.8	62.6
CDY09586	Canola	cytosol	65.18	62.5
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	65.98	62.41
CDY02293	Canola	cytosol, mitochondrion, nucleus	65.18	62.22
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	65.34	62.18
CDY27653	Canola	cytosol	58.03	59.06
Bra025440.1-P	Field mustard	cytosol	52.62	57.77
CDX99692	Canola	cytosol, mitochondrion, nucleus	58.98	57.52
GSMUA_AchrUn_...	Banana	cytosol	38.47	56.94
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	45.47	56.63
GSMUA_Achr2P02890_001	Banana	cytosol	48.01	53.55
GSMUA_Achr9P26440_001	Banana	cytosol	44.36	47.94
GSMUA_Achr8P04840_001	Banana	cytosol	43.08	46.09
GSMUA_Achr4P01950_001	Banana	cytosol	28.93	44.61
GSMUA_Achr10P...	Banana	cytosol	38.47	43.76
GSMUA_Achr3P20380_001	Banana	cytosol	38.16	41.74
GSMUA_Achr6P27970_001	Banana	cytosol	32.11	39.07
GSMUA_Achr5P01710_001	Banana	cytosol	35.61	38.55
GSMUA_Achr4P10900_001	Banana	cytosol	34.02	38.42
GSMUA_Achr10P...	Banana	cytosol	33.07	36.56
GSMUA_Achr3P04740_001	Banana	cytosol	34.18	36.44
GSMUA_Achr7P21950_001	Banana	plastid	32.43	36.23
GSMUA_Achr8P30170_001	Banana	plastid	31.96	36.02
GSMUA_Achr1P21440_001	Banana	cytosol	34.82	36.02
GSMUA_Achr10P...	Banana	cytosol	31.64	35.35
GSMUA_Achr7P26250_001	Banana	cytosol	34.98	35.26
GSMUA_Achr1P11260_001	Banana	plastid	32.11	35.25
GSMUA_Achr8P16390_001	Banana	cytosol	28.46	34.29
GSMUA_Achr2P13430_001	Banana	cytosol	35.93	33.68
GSMUA_Achr7P26300_001	Banana	cytosol	30.52	32.43
GSMUA_Achr3P12020_001	Banana	cytosol	26.55	30.59
GSMUA_Achr11P...	Banana	cytosol, plastid	28.14	30.57
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	28.93	30.33
GSMUA_Achr3P14590_001	Banana	cytosol	27.34	30.02
CDY12056	Canola	plasma membrane	62.64	24.41
GSMUA_Achr3P25690_001	Banana	nucleus	37.2	19.6

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr5G00550_001	EnsemblPlants:GSMUA_Achr5P00550_001	EnsemblPlants:GSMUA_Achr5T00550_001	InterPro:IPR000210	InterPro:IPR027356
UniProt:M0SUI4	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0002949588	SEG:seg

Description

BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr5G00550_001]

Coordinates

chr5:-:320847..325923

Molecular Weight (calculated)

70326.0 Da

IEP (calculated)

6.026

GRAVY (calculated)

-0.208

Length

629 amino acids

Sequence
(BLAST)

001: MACVKLGSKT DGFQRQGQAW FCTTGLPSDV TAEVGEMTFH LHKFPLLSKC GLLDKLIRQK SEEGEDGCVI QLPDIPGGPK AFELAAKFCY GMKMELTASN
101: VVYLRCAAEH LEMTEEIAEG NLITQTEVFL NQVVLRSWKD SIKALQTCDY VLPYAEDLQI VKRCIDSLAI KACKDPSLVG WPIVEHGPMQ SPGGSILWNG
201: ISTGARPRYS SSDWWYEDVS CLSLPMYRRL ISAMETRGIG QEIISGSLTF YARRHLPGLD RRQSISEANI RLEPRALMAL PSEEEQRHLL EEIDKLLPSQ
301: KGLMSTKILF GLLRTAMILR ASPSCMFNLE RRIGMQLDQA SLEDLLIPNF SDSTETLYNV DCIHRIVEHF VARNQMIGGA SPDVADDDQF LGSPSLIPVI
401: AVAKLVDGYL AEVASDANLK PSKFQALAAA IPDDVRPLDD GLYRAIDIYL KAHSWLAESQ REELCRLMNC QKLSLEACTH AAQNERLPLR VVVQVLFFEQ
501: LQLKTSIAGC FLVSDNLDGS RPLRSGLPIS GEDTGWASAI RENQVLKVSM DSMRMRVSEL EKECSSMREE LEKLTKGRSG WSTGGRKFRS NIIKGQICSA
601: QEDAISKERD TVQTFEKEQL KLTKYKKHM

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.