CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27653	Canola	cytosol	90.39	94.34
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	81.24	78.8
CDY09586	Canola	cytosol	79.53	78.2
CDY02293	Canola	cytosol, mitochondrion, nucleus	79.69	78.0
CDX90249	Canola	cytosol, mitochondrion, nucleus	74.42	76.07
Solyc02g021640.2.1	Tomato	nucleus	65.27	66.93
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	65.12	66.77
VIT_10s0003g04490.t01	Wine grape	cytosol	65.27	66.61
KRH37734	Soybean	cytosol	64.65	64.85
KRH12771	Soybean	cytosol	64.65	64.85
GSMUA_Achr5P02440_001	Banana	cytosol	54.57	61.43
GSMUA_Achr6P30010_001	Banana	cytosol	51.32	60.4
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	58.76	60.25
EER91175	Sorghum	cytosol	58.76	60.06
GSMUA_Achr5P00550_001	Banana	cytosol	57.52	58.98
GSMUA_Achr4P31620_001	Banana	cytosol	54.57	58.96
GSMUA_Achr9P26110_001	Banana	cytosol	55.04	58.58
TraesCS5D01G385100.1	Wheat	plastid	56.43	57.23
HORVU5Hr1G093120.2	Barley	cytosol	56.12	57.1
TraesCS5A01G042600.1	Wheat	cytosol	54.73	55.77
TraesCS5D01G051100.1	Wheat	cytosol	54.57	55.7
Os08t0130600-01	Rice	plasma membrane	55.35	55.69
Os12t0613250-00	Rice	plasma membrane	56.12	55.69
TraesCS5A01G375500.3	Wheat	peroxisome	54.42	54.5
TraesCS7D01G306400.1	Wheat	cytosol	54.11	54.28
HORVU7Hr1G073650.1	Barley	cytosol	53.64	53.98
EES14497	Sorghum	cytosol	55.04	53.95
TraesCS5B01G377600.1	Wheat	cytosol	56.59	53.83
TraesCS7A01G309700.1	Wheat	cytosol	53.64	53.81
TraesCS7B01G209700.1	Wheat	cytosol	53.64	53.81
TraesCS5B01G046200.2	Wheat	mitochondrion	52.56	52.8
Zm00001d035208_P002	Maize	cytosol	54.26	52.79
CDY10395	Canola	cytosol	42.95	51.01
CDX70320	Canola	cytosol	44.19	49.83
CDX80858	Canola	cytosol	43.72	47.96
CDY11245	Canola	cytosol	43.72	47.16
CDX85639	Canola	cytosol	41.55	46.85
CDY09812	Canola	cytosol	42.17	44.74
HORVU5Hr1G010370.2	Barley	plastid	54.42	44.49
CDX69627	Canola	cytosol	41.86	44.48
CDY45241	Canola	cytosol	38.76	41.81
CDX77951	Canola	cytosol	35.5	41.79
CDX73781	Canola	cytosol	34.73	41.1
CDY30765	Canola	cytosol	40.31	41.01
CDY72506	Canola	cytosol	8.06	40.94
CDY29723	Canola	cytosol	39.84	36.87
CDY72267	Canola	cytosol	28.84	36.76
CDY72257	Canola	cytosol	28.68	36.56
CDY20341	Canola	cytosol	40.16	36.48
CDX85365	Canola	cytosol	34.73	36.13
CDX86278	Canola	cytosol	34.57	35.97
CDY38923	Canola	cytosol	26.36	35.71
CDY68489	Canola	cytosol, plastid	24.81	35.63
CDX89539	Canola	cytosol	26.36	35.49
CDY00659	Canola	plastid	31.16	34.36
CDX73937	Canola	plastid	31.01	34.25
CDX81314	Canola	cytosol	27.44	33.65
CDY37857	Canola	cytosol	31.16	33.5
CDY18660	Canola	cytosol	27.29	33.33
CDY69095	Canola	cytosol	28.68	32.98
CDY22422	Canola	cytosol	29.3	32.87
CDY29566	Canola	cytosol	29.3	32.7
CDY44035	Canola	cytosol	29.15	32.7
CDX84515	Canola	cytosol	36.74	32.64
CDY09561	Canola	cytosol	30.54	32.62
CDX72639	Canola	cytosol	29.15	32.53
CDY57436	Canola	cytosol	30.39	32.5
CDY12841	Canola	cytosol	30.23	32.34
CDY02305	Canola	cytosol	30.39	32.29
CDY12846	Canola	cytosol	28.22	32.21
CDY18715	Canola	cytosol	36.12	32.18
CDY30615	Canola	cytosol	24.81	32.06
CDX81462	Canola	cytosol	29.92	32.01
CDY57361	Canola	cytosol	24.65	31.86
CDX84827	Canola	cytosol	27.75	31.68
CDY37223	Canola	cytosol	29.61	31.68
CDY10743	Canola	cytosol	28.53	31.67
CDX83620	Canola	cytosol	26.82	31.63
CDY02075	Canola	cytosol	28.37	31.55
CDX81221	Canola	cytosol	35.66	31.51
CDY23992	Canola	cytosol	27.6	31.5
CDY13635	Canola	cytosol	27.91	31.36
CDY18140	Canola	cytosol	30.54	31.27
CDX89922	Canola	cytosol	30.54	31.27
CDY52208	Canola	plastid	31.32	31.27
CDY32492	Canola	cytosol	30.23	30.56
CDY50369	Canola	cytosol	24.19	30.41
CDY17704	Canola	cytosol	26.36	30.3
CDX77798	Canola	cytosol	26.36	30.3
CDX68790	Canola	cytosol	26.82	30.24
CDX75198	Canola	cytosol	26.67	29.81
CDY37449	Canola	cytosol	22.33	29.63
CDY12056	Canola	plasma membrane	73.8	29.49
CDX83030	Canola	plastid	23.41	28.22
CDX69851	Canola	cytosol	27.13	27.78
CDX96986	Canola	cytosol	26.51	27.32
Os12t0613300-02	Rice	nucleus	1.09	2.36

Protein Annotations

EnsemblPlants:CDX99692	EnsemblPlantsGene:GSBRNA2T00108258001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370
PANTHER:PTHR32370:SF12	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	ProteinID:CDX99692
ProteinID:CDX99692.1	SUPFAM:SSF54695	UniParc:UPI0004EED776	UniPathway:UPA00143	MapMan:35.1	:

Description

BnaC04g34490D

Coordinates

chrLK031912:+:1191772..1194671

Molecular Weight (calculated)

72136.7 Da

IEP (calculated)

6.772

GRAVY (calculated)

-0.327

Length

645 amino acids

Sequence
(BLAST)

001: MLTGSMACMK LGSKSDSFKR QGQDWFCTTG PPSDIIIEVG EVSFHLHKFP LLSRSGAMER RIAEASKEGD DKCLIQISDF PGGDKTFELV AKFCYGVKLE
101: LTASNVVCLR CAAKHLGMTE EYGEGNLISQ TGKFFNQVVF KSWKYSIKAL QCCDEVLKYA DEFNITNKCI ESLAMRALAD PNSFVEYGGP MQSPGGSVLW
201: NGISTGARRE DTSSDWWYED ASMLSFALFK RLITLMDSRG IREEIVAGSL TYYTRKYLPV LKRRRHSGSF SITPLSTGSV LSEEEQKHLL EEIQELDLPC
301: MQKGLLPTKF FVDMLIIAKI LKASPSCIEN LEKRIGRQLD QATLEDLVMP SFSHTVETLY DVDSVQRILD HFLSWDHTMP VGASSSCSSV DDGNLNESSQ
401: SMTAVAKLID GYLAEVAPDA NLKLPKFQAL AASVPDYARL LDDGLYRAID IYLKHHPWLA EKEREDLCRL LDCQKLSTEA CTHAAQNERL PLRIIVQVLF
501: IEQLQLKASV AEYLPVLGSL VGRSRKLGSD GFSGESTKGG WETAVRENQD LKVGMDKMRM RVCELEKECS KMRQEIEKLD KTTKGGGAFG SGSKTWENVS
601: KKLGFGMKLK SHQMDSAQKV SSLKSNNENA KIEKLKDVKE RQEKY

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.