Factsheet for TraesCS5B01G046200.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G042600.1	Wheat	cytosol	94.7	96.05
TraesCS5D01G051100.1	Wheat	cytosol	94.39	95.89
Os12t0613250-00	Rice	plasma membrane	79.44	78.46
HORVU5Hr1G010370.2	Barley	plastid	94.24	76.68
TraesCS5B01G377600.1	Wheat	cytosol	71.81	67.99
VIT_10s0003g04490.t01	Wine grape	cytosol	64.64	65.66
Solyc02g021640.2.1	Tomato	nucleus	61.84	63.12
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	61.84	63.12
KRH37734	Soybean	cytosol	62.77	62.67
KRH12771	Soybean	cytosol	62.62	62.52
GSMUA_Achr5P02440_001	Banana	cytosol	55.45	62.13
GSMUA_Achr6P30010_001	Banana	cytosol	52.96	62.04
GSMUA_Achr4P31620_001	Banana	cytosol	57.32	61.64
GSMUA_Achr9P26110_001	Banana	cytosol	57.32	60.73
TraesCS7B01G209700.1	Wheat	cytosol	58.41	58.32
CDX90249	Canola	cytosol, mitochondrion, nucleus	57.17	58.16
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	59.66	57.59
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	59.19	57.49
CDY09586	Canola	cytosol	58.72	57.47
CDY02293	Canola	cytosol, mitochondrion, nucleus	58.88	57.36
CDY27653	Canola	cytosol	52.34	54.37
CDX99692	Canola	cytosol, mitochondrion, nucleus	52.8	52.56
Bra025440.1-P	Field mustard	cytosol	46.57	52.18
TraesCS3B01G349200.1	Wheat	cytosol	46.73	46.37
TraesCS2B01G557300.2	Wheat	cytosol	43.93	43.59
TraesCS5B01G383100.1	Wheat	plastid	39.1	38.38
TraesCS5B01G408200.1	Wheat	cytosol	40.19	38.28
TraesCS1B01G298700.1	Wheat	cytosol, plastid	23.52	36.47
TraesCS5B01G076500.1	Wheat	cytosol	32.09	33.17
TraesCS5B01G145100.1	Wheat	plastid	32.09	32.7
TraesCS4B01G078900.3	Wheat	cytosol	32.24	32.65
TraesCS5B01G461900.4	Wheat	plastid	32.71	31.96
TraesCS4B01G256600.1	Wheat	cytosol	29.91	31.74
TraesCS6B01G117400.1	Wheat	cytosol	36.29	31.57
TraesCS4B01G255500.1	Wheat	cytosol	28.97	30.74
TraesCS7B01G052800.1	Wheat	cytosol	31.0	30.47
TraesCS6B01G237800.1	Wheat	cytosol	28.5	29.23
TraesCS5B01G222700.2	Wheat	cytosol	28.35	28.57
TraesCS5B01G168600.3	Wheat	cytosol	26.48	28.33
TraesCS4B01G122300.1	Wheat	cytosol, plastid	24.14	27.15
CDY12056	Canola	plasma membrane	57.17	22.74
Os12t0613300-02	Rice	nucleus	0.47	1.01

Protein Annotations

EnsemblPlants:TraesCS5B01G046200.2	EnsemblPlantsGene:TraesCS5B01G046200	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF32	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:+:51825708..51828719

Molecular Weight (calculated)

71033.0 Da

IEP (calculated)

6.875

GRAVY (calculated)

-0.144

Length

642 amino acids

Sequence
(BLAST)

001: MYRTTSMKHQ GLVRLKCQIV QVSPSSTSGF CTTGLPSDVV VQVGEMSFHL HKFPLLSKSA ILGRLIEENS DQDECTIKLS DIPGGAKSFE LVARFCYGLK
101: IELSPANIVH LRCAAEYLEM TEEIAQDNLI HQAEMFFNQV VLRSWKDSLE ALKTCDVLLP HAEDLHIAKR CVESLAAKAS IDPDLFGWPV SEHGAMHSPG
201: GSVLWNGIST GAKLGNFSSD WWYGDASSLS FPTYKRLIST MESRGAKEEI VAGSLTYYAK KCLPGLNRRQ SMGPVPLTSA AATLSEEEQR HLLEDIDRML
301: PLQRGLISTN VLLWLLRTAM ILKVNRACIS NLEKRVGMQL DEATLEDLLL PNFSYTMDTL YNVECVRRIL DHFLAMDQTM GGGSPCLDDV MGSPSLAPIT
401: AVAKLIDGYL AEIAPDINLK PPKFESLATA LPEYARPLDD GLYRAIDVYL KAHSCLPESE REHLCRLIDC QKLSLEACTH AAQNERLPLR VVVQVLFFEQ
501: LQLRTSIAGC LMVSDNLEGS SRPLHGSGTI ATSGEAGARW VTSAAVRENQ ALRAGMDSMR LRLAELEREC SGMRQDIRKF GGAPGKDGWA ARVQRMFSLK
601: MKLQMCSTEE GKMSDRHRTA SAKLEKLQAK VSSHKKHLTI DA

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.