Factsheet for TraesCS5B01G461900.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G463700.1	Wheat	plastid	93.91	94.49
TraesCS7A01G184200.2	Wheat	plastid	90.72	89.22
HORVU1Hr1G055870.1	Barley	plastid	88.28	87.22
Zm00001d047483_P002	Maize	plastid	80.52	81.76
OQU92601	Sorghum	plastid	81.28	80.79
Os03t0347700-01	Rice	mitochondrion, plastid	79.91	78.24
GSMUA_Achr8P30170_001	Banana	plastid	55.4	65.23
GSMUA_Achr1P11260_001	Banana	plastid	55.86	64.05
PGSC0003DMT400029528	Potato	cytosol	49.01	63.26
Solyc09g074630.2.1	Tomato	cytosol	49.16	63.21
VIT_07s0104g01440.t01	Wine grape	plastid	59.21	61.65
KRH68133	Soybean	cytosol, plastid	57.53	60.1
KRG96392	Soybean	plastid	56.93	59.55
KRH31912	Soybean	cytosol	56.93	59.55
KRH71541	Soybean	plastid	56.93	59.37
CDX89922	Canola	cytosol	54.79	57.14
Bra033365.1-P	Field mustard	cytosol	54.79	57.14
CDY18140	Canola	cytosol	54.49	56.83
AT1G03010.1	Thale cress	cytosol	54.79	56.78
CDY32492	Canola	cytosol	54.79	56.43
Bra032564.1-P	Field mustard	cytosol, plastid	54.64	56.27
Bra029894.1-P	Field mustard	plastid	52.97	53.87
CDY52208	Canola	plastid	52.66	53.56
CDX83030	Canola	plastid	42.47	52.15
AT2G47860.3	Thale cress	plastid	52.21	52.13
CDY37449	Canola	cytosol	37.9	51.23
TraesCS5B01G145100.1	Wheat	plastid	39.12	40.79
TraesCS4B01G255500.1	Wheat	cytosol	33.64	36.53
TraesCS3B01G349200.1	Wheat	cytosol	33.33	33.85
TraesCS7B01G209700.1	Wheat	cytosol	32.72	33.44
TraesCS5B01G046200.2	Wheat	mitochondrion	31.96	32.71
TraesCS4B01G122300.1	Wheat	cytosol, plastid	27.85	32.05
TraesCS5B01G377600.1	Wheat	cytosol	32.88	31.86
TraesCS5B01G383100.1	Wheat	plastid	31.35	31.5
TraesCS5B01G408200.1	Wheat	cytosol	31.05	30.27
TraesCS2B01G557300.2	Wheat	cytosol	29.22	29.68
TraesCS1B01G298700.1	Wheat	cytosol, plastid	18.57	29.47
TraesCS6B01G117400.1	Wheat	cytosol	32.57	29.0
TraesCS4B01G256600.1	Wheat	cytosol	25.88	28.1
TraesCS6B01G237800.1	Wheat	cytosol	26.64	27.96
TraesCS5B01G076500.1	Wheat	cytosol	26.18	27.7
TraesCS4B01G078900.3	Wheat	cytosol	26.03	26.97
TraesCS7B01G052800.1	Wheat	cytosol	26.33	26.49
TraesCS5B01G222700.2	Wheat	cytosol	25.11	25.9
TraesCS5B01G168600.3	Wheat	cytosol	22.83	25.0

Protein Annotations

EnsemblPlants:TraesCS5B01G461900.4	EnsemblPlantsGene:TraesCS5B01G461900	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF30	PFAM:PF00651	PFAM:PF03000	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:637387205..637389357

Molecular Weight (calculated)

70957.8 Da

IEP (calculated)

8.830

GRAVY (calculated)

-0.077

Length

657 amino acids

Sequence
(BLAST)

001: MVAVLLPRPL SGFIHPHSSP TAHGTCPIHT PPAPVCLCRP PTDVSSDLTV EVGTSSFALH KFPLVSRSGK IRRLVAEAKD AKLARLTLHA TPGGAPAFEL
101: AAKFCYGVHV DITVANVAML RCAARYLQMT DDFSDKNLEL RAEAFLRDAV LPSIASSVAV LRTCEALLPA AEDVNLVARL IAAIANNVCK EQLASGLLSR
201: LDQTGAQLKP AALDSPGEGD WWGKSVAGLG LDLFQRLLSA VKSKGLRQET VTRILINYAH NSLYGLMACR DMDKCGGVTD TDTDTDAVKK QRAVVETIVG
301: LLPAQSKKSP VPMAFLSGLL RTAMALSASN ICKADLEKRI GMQLEQAILE DILIATGSGE ASTLYDTDVV ARIFSVFLNL DEDKEEDGGG GFDYDSPRSP
401: KQSCIVKASK LLDSYLAEIA LDSNLVPAKF ISLAEILPDH ARLVTDGIYR AVDIFLKVHP NIKEAERYRM CKAIDCQRLT PDACSHAAQN ERLPVQMAVQ
501: VLYFEQIRLR SAIQSGGGGG HDGALFFGGG AVSSASTVQG GGGGNNMRSG SGVGSGAMSP RDNYASVRRE NRELKLEVSR MRMRLTDLEK DHVSMKRELV
601: RVNPANRLLR SFARSFGRLN TLFRMRPAAE PGLQQLGAKA TADAKVLFQR RRRHSIS

Best Arabidopsis Sequence Match ( AT1G03010.3 )
(BLAST)

001: MEFKYTKDLL IHNSEILSLN LDGFFICFRR PISDVSSDLT VQVGSSSFCL HKFPLVSRSG KIRKLLADPK ISNVCLSNAP GGSEAFELAA KFCYGINIEI
101: NLLNIAKLRC ASHYLEMTED FSEENLASKT EHFLKETIFP SILNSIIVLH HCETLIPVSE DLNLVNRLII AVANNACKEQ LTSGLLKLDY SFSGTNIEPQ
201: TPLDWWGKSL AVLNLDFFQR VISAVKSKGL IQDVISKILI SYTNKSLQGL IVRDPKLEKE RVLDSEGKKK QRLIVETIVR LLPTQGRRSS VPMAFLSSLL
301: KMVIATSSSA STGSCRSDLE RRIGLQLDQA ILEDVLIPIN LNGTNNTMYD IDSILRIFSI FLNLDEDDEE EEHHHLQFRD ETEMIYDFDS PGSPKQSSIL
401: KVSKLMDNYL AEIAMDPNLT TSKFIALAEL LPDHARIISD GLYRAVDIYL KVHPNIKDSE RYRLCKTIDS QKLSQEACSH AAQNERLPVQ MAVQVLYFEQ
501: IRLRNAMSSS IGPTQFLFNS NCHQFPQRSG SGAGSGAISP RDNYASVRRE NRELKLEVAR MRMRLTDLEK DHISIKQELV KSNPGTKLFK SFAKKISKLN
601: SLFSFSSLKP SLSGKASSES RFLFQRKRRH SVS

Arabidopsis Description

BTB/POZ domain-containing protein At1g03010 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.