Factsheet for TraesCS3B01G349200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G317300.1	Wheat	cytosol	97.84	97.53
TraesCS3D01G314000.1	Wheat	cytosol	97.53	96.78
HORVU3Hr1G076740.1	Barley	cytosol	93.66	94.25
Zm00001d043271_P001	Maize	cytosol	82.38	82.38
Os01t0780600-01	Rice	plasma membrane	83.46	81.94
EES03716	Sorghum	cytosol	82.38	81.87
GSMUA_AchrUn_...	Banana	cytosol	38.64	58.82
VIT_13s0019g04420.t01	Wine grape	cytosol	53.01	55.41
CDY10395	Canola	cytosol	46.37	55.25
VIT_08s0040g01800.t01	Wine grape	cytosol	52.7	54.65
KRH32482	Soybean	cytosol	49.61	54.5
Solyc09g007820.1.1	Tomato	cytosol	50.23	54.44
KRH21111	Soybean	cytosol	51.31	54.34
CDX70320	Canola	cytosol	47.91	54.2
KRH19874	Soybean	cytosol	49.3	54.16
CDX80858	Canola	cytosol	49.15	54.08
AT5G03250.1	Thale cress	cytosol	49.46	54.05
Bra005737.1-P	Field mustard	cytosol	49.0	53.91
PGSC0003DMT400093531	Potato	cytosol	44.67	53.72
CDY11245	Canola	cytosol	49.0	53.01
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	49.77	52.79
CDY72506	Canola	cytosol	10.05	51.18
AT5G13600.1	Thale cress	cytosol	46.52	50.93
KRH34860	Soybean	cytosol	48.38	50.65
CDX85639	Canola	cytosol	44.36	50.17
KRG91918	Soybean	cytosol	47.76	50.08
TraesCS7B01G209700.1	Wheat	cytosol	48.84	49.14
TraesCS2B01G557300.2	Wheat	cytosol	48.69	48.69
TraesCS5B01G377600.1	Wheat	cytosol	50.85	48.53
Bra008815.1-P	Field mustard	cytosol	44.82	47.78
CDY09812	Canola	cytosol	44.67	47.53
CDX69627	Canola	cytosol	44.36	47.28
TraesCS5B01G046200.2	Wheat	mitochondrion	46.37	46.73
Bra023423.1-P	Field mustard	cytosol	36.79	43.12
TraesCS5B01G408200.1	Wheat	cytosol	37.09	35.61
TraesCS5B01G383100.1	Wheat	plastid	34.78	34.4
TraesCS4B01G256600.1	Wheat	cytosol	32.15	34.38
TraesCS4B01G078900.3	Wheat	cytosol	33.38	34.07
TraesCS5B01G076500.1	Wheat	cytosol	32.15	33.49
TraesCS5B01G461900.4	Wheat	plastid	33.85	33.33
TraesCS5B01G145100.1	Wheat	plastid	32.3	33.17
TraesCS1B01G298700.1	Wheat	cytosol, plastid	20.71	32.37
TraesCS4B01G255500.1	Wheat	cytosol	29.37	31.41
TraesCS6B01G117400.1	Wheat	cytosol	35.55	31.17
TraesCS6B01G237800.1	Wheat	cytosol	30.14	31.15
TraesCS7B01G052800.1	Wheat	cytosol	31.38	31.09
TraesCS5B01G222700.2	Wheat	cytosol	30.6	31.08
TraesCS5B01G168600.3	Wheat	cytosol	26.43	28.5
TraesCS4B01G122300.1	Wheat	cytosol, plastid	24.27	27.5

Protein Annotations

EnsemblPlants:TraesCS3B01G349200.1	EnsemblPlantsGene:TraesCS3B01G349200	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF41	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3B:-:559340808..559343631

Molecular Weight (calculated)

69746.7 Da

IEP (calculated)

5.057

GRAVY (calculated)

-0.014

Length

647 amino acids

Sequence
(BLAST)

001: MVTMKLGSKP DIFVLEGLTW RCMTELESDV VVEVGDMSFY LHKFPLLSRS GVLQRLISEY QPPSDGGGGM CTLQLDDIPG GAKAFELAAR FCYDVKIELN
101: ALNVVCLRCA AEYLGMTDDY AEGNLIAQAE SFLADVLANW KDSVRALETC EGVLPAAEDL HIVPRCITAL ASKACASDAA AWSTHGAKNA SVDGDALWNG
201: IGSGDTPRGA AAAASAMDWW YEDVSLLSLP MFKRLIQAME AKSMRAESIA GAIMFYAGRL LPGLNRSASF SNVSFADYGG GAGSRSATPR SATASLSGTS
301: DGDQRYFLEE IIALLPTKKG VTSTKFLLGL LRTAMLLHAS PLCRENLERR IGAQLEDASL EDLLVPNLGY TVDTLYDIDC VQRILDYFMS SMDGLGTGYT
401: SPALAEEGSQ LGLPHAATPP AVAPIAMVAK LMDGYLAEVA PDTNLKLPKF QALAAVVPDY ARTVDDGIYR AMDIYLKSHP WLSESEREQL CRLMNCQKLS
501: LEACTHAAQN ERLPLRVVVQ VLFFEQLRLR TSIAGWFFVS DNAATATDGA HLHHPGNAGA IVPKGSAVVD SGAAGQDEDV VMVTPEGKGS ETMSNVKARV
601: SELEKECMSM KQEIRRLGKP RRSWSILTRK CGFGAKVQQA QTAMSGK

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.