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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
  • plastid 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G197100.1
TraesCS2B01G224600.1
TraesCS2D01G205000.1
TraesCS4A01G275400.1
TraesCS4B01G038900.1
TraesCS4D01G035800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G66560.1 TraesCS2A01G197100.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS2B01G224600.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS2D01G205000.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4A01G275400.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4B01G038900.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4D01G035800.1 AT1G03140.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G389200.2 Wheat cytosol, plastid 93.88 94.9
TraesCS5A01G379300.1 Wheat cytosol, plastid 93.43 93.86
HORVU5Hr1G093880.1 Barley cytosol 59.33 93.27
HORVU5Hr1G093850.15 Barley mitochondrion 89.91 89.63
TraesCS1B01G298700.1 Wheat cytosol, plastid 55.05 86.96
OQU91026 Sorghum cytosol, nucleus, plastid 72.32 79.1
Zm00001d033941_P001 Maize mitochondrion, plastid 76.3 79.08
Os03t0738900-00 Rice nucleus, plasma membrane, plastid 77.98 77.74
VIT_00s0207g00230.t01 Wine grape cytosol 50.92 52.44
GSMUA_Achr8P04840_001 Banana cytosol 46.33 51.53
CDY45241 Canola cytosol 45.26 49.5
Solyc02g090070.2.1 Tomato nucleus 48.47 48.69
KRH28552 Soybean cytosol 43.88 48.48
KRH08351 Soybean cytosol 47.55 47.99
PGSC0003DMT400026008 Potato cytosol 48.32 47.95
TraesCS5B01G408200.1 Wheat cytosol 49.24 47.77
CDY30765 Canola cytosol 45.72 47.16
CDX73781 Canola cytosol 38.23 45.87
CDX77951 Canola cytosol 38.38 45.8
KRH76914 Soybean cytosol 35.63 45.69
AT5G66560.1 Thale cress cytosol 46.33 45.36
AT3G50840.1 Thale cress cytosol 39.45 45.34
KRH69999 Soybean endoplasmic reticulum 47.09 45.29
Bra012082.1-P Field mustard cytosol 46.33 45.29
Bra036858.1-P Field mustard cytosol 38.84 44.25
TraesCS5B01G046200.2 Wheat mitochondrion 38.38 39.1
TraesCS7B01G209700.1 Wheat cytosol 37.92 38.57
TraesCS5B01G377600.1 Wheat cytosol 39.91 38.5
TraesCS3B01G349200.1 Wheat cytosol 34.4 34.78
TraesCS2B01G557300.2 Wheat cytosol 33.33 33.69
TraesCS5B01G461900.4 Wheat plastid 31.5 31.35
TraesCS4B01G255500.1 Wheat cytosol 28.9 31.24
TraesCS5B01G145100.1 Wheat plastid 29.66 30.79
TraesCS4B01G122300.1 Wheat cytosol, plastid 26.15 29.95
TraesCS6B01G237800.1 Wheat cytosol 28.44 29.71
TraesCS5B01G076500.1 Wheat cytosol 27.06 28.5
TraesCS6B01G117400.1 Wheat cytosol 31.96 28.32
TraesCS7B01G052800.1 Wheat cytosol 27.98 28.02
TraesCS4B01G256600.1 Wheat cytosol 25.54 27.6
TraesCS4B01G078900.3 Wheat cytosol 26.76 27.6
TraesCS5B01G222700.2 Wheat cytosol 25.54 26.22
TraesCS5B01G168600.3 Wheat cytosol 22.63 24.67
GSMUA_Achr3P25690_001 Banana nucleus 42.97 23.53
Protein Annotations
EnsemblPlants:TraesCS5B01G383100.1EnsemblPlantsGene:TraesCS5B01G383100GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:BTB/POZ_dom
InterPro:IPR000210InterPro:IPR027356InterPro:NPH3_domInterPro:SKP1/BTB/POZ_sfncoils:CoilPANTHER:PTHR32370
PANTHER:PTHR32370:SF78PFAM:PF03000PFscan:PS51649SEG:segSMART:SM00225SUPFAM:SSF54695
MapMan:35.1:::::
Description
No Description!
Coordinates
chr5B:+:562046476..562048970
Molecular Weight (calculated)
71653.7 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.383
Length
654 amino acids
Sequence
(BLAST)
001: MSSSSMARHG PSRRGGEAWF CTTGLPSDVV FEVQDMSFHL HKFPLMSKSR KISRMLAEQD EQRPAGQRRR RRRGSSVANA EEHAVAAAAA ETEIVEAEEE
101: EEEEDGDKEQ EQVRMEDGKS YSITFPDFPG GPGTFEAAAK FCYGVRVELT PWNVAPLRCA AEYLEMTEEH SEDNLAARAE AYLSQSVLRH PGEATKALKS
201: CEELLPHTEE LGIVARCVET IAARSSATSR SWFGDLAVLG LHMYKRVMAA MAAREDVRTE ALEGCLVSYA KATLPGLSRS MRWRRASAPV SSEVEQRDLL
301: EAVVASLPAD KGSGSVVTAK FLFALLRTAH ILRASDAARA AIERKAATQL EQATVEDVLI PSYSGAAETL YDVDCVERVV RHFLAEEEVG EDEASSSAAI
401: TEEEAAARTT ASRPSAVAMV QVGKLVDNYL AEVASDANLK PAKFCKLALA MPDHARIYDD GVYRAVDIYL KAHPRLTAEE RDRVCGVVDC RKLTVEACTH
501: AAQNERLPLR AVLQVLFFEQ LQLRRAITGT LLASTASPRA RHPNPHPQRP AAALRHAADP SEAWRTTTVQ ESQTLRVDMD GMRSRVQGLE RECSSMRRAI
601: KKIDGGASPG SAGPDADTPA GWRSRYRCKF STQVCDSQAR DAVVSRASRM GMSP
Best Arabidopsis Sequence Match ( AT5G66560.1 )
(BLAST)
001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
Arabidopsis Description
BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.