Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77951 | Canola | cytosol | 93.94 | 93.43 |
| AT3G50840.1 | Thale cress | cytosol | 70.28 | 67.31 |
| CDY45241 | Canola | cytosol | 64.95 | 59.2 |
| CDY30765 | Canola | cytosol | 65.5 | 56.31 |
| KRH28552 | Soybean | cytosol | 54.31 | 50.0 |
| KRH08351 | Soybean | cytosol | 59.08 | 49.69 |
| VIT_00s0207g00230.t01 | Wine grape | cytosol | 56.7 | 48.66 |
| Solyc02g090070.2.1 | Tomato | nucleus | 57.43 | 48.08 |
| PGSC0003DMT400026008 | Potato | cytosol | 57.43 | 47.5 |
| GSMUA_Achr9P26440_001 | Banana | cytosol | 50.46 | 47.25 |
| KRH69999 | Soybean | endoplasmic reticulum | 58.35 | 46.76 |
| KRH76914 | Soybean | cytosol | 43.49 | 46.47 |
| GSMUA_Achr8P04840_001 | Banana | cytosol | 48.81 | 45.24 |
| HORVU5Hr1G093880.1 | Barley | cytosol | 31.56 | 41.35 |
| OQU91026 | Sorghum | cytosol, nucleus, plastid | 43.49 | 39.63 |
| EER93390 | Sorghum | cytosol | 48.99 | 39.5 |
| Zm00001d033941_P001 | Maize | mitochondrion, plastid | 45.5 | 39.3 |
| TraesCS5D01G389200.2 | Wheat | cytosol, plastid | 46.61 | 39.26 |
| TraesCS5A01G403400.1 | Wheat | cytosol | 48.62 | 39.2 |
| TraesCS5B01G408200.1 | Wheat | cytosol | 48.44 | 39.17 |
| TraesCS5D01G413400.1 | Wheat | cytosol | 48.26 | 39.08 |
| Os03t0767600-01 | Rice | cytosol | 48.81 | 38.95 |
| TraesCS5A01G379300.1 | Wheat | cytosol, plastid | 46.42 | 38.86 |
| HORVU5Hr1G098170.1 | Barley | cytosol, mitochondrion | 48.26 | 38.39 |
| Os03t0738900-00 | Rice | nucleus, plasma membrane, plastid | 46.05 | 38.26 |
| TraesCS5B01G383100.1 | Wheat | plastid | 45.87 | 38.23 |
| HORVU5Hr1G093850.15 | Barley | mitochondrion | 45.87 | 38.11 |
| TraesCS1B01G298700.1 | Wheat | cytosol, plastid | 28.62 | 37.68 |
| Zm00001d013182_P003 | Maize | cytosol, mitochondrion | 48.44 | 37.55 |
| TraesCS2D01G507400.1 | Wheat | nucleus | 37.61 | 37.27 |
| CDY27653 | Canola | cytosol | 41.83 | 36.89 |
| CDX90249 | Canola | cytosol, mitochondrion, nucleus | 41.83 | 36.13 |
| CDY10395 | Canola | cytosol | 35.78 | 35.91 |
| CDY09586 | Canola | cytosol | 43.12 | 35.82 |
| CDY02293 | Canola | cytosol, mitochondrion, nucleus | 43.3 | 35.81 |
| CDX70320 | Canola | cytosol | 37.25 | 35.49 |
| CDX99692 | Canola | cytosol, mitochondrion, nucleus | 41.1 | 34.73 |
| CDX85639 | Canola | cytosol | 36.15 | 34.44 |
| CDY68489 | Canola | cytosol, plastid | 28.07 | 34.08 |
| CDY09812 | Canola | cytosol | 37.8 | 33.88 |
| CDX80858 | Canola | cytosol | 36.51 | 33.84 |
| CDX69627 | Canola | cytosol | 37.61 | 33.77 |
| CDY72267 | Canola | cytosol | 31.01 | 33.4 |
| CDY11245 | Canola | cytosol | 36.51 | 33.28 |
| CDY72257 | Canola | cytosol | 30.83 | 33.2 |
| CDY72506 | Canola | cytosol | 7.52 | 32.28 |
| CDY12846 | Canola | cytosol | 32.11 | 30.97 |
| CDX81314 | Canola | cytosol | 29.72 | 30.8 |
| CDY23992 | Canola | cytosol | 31.74 | 30.62 |
| CDY69095 | Canola | cytosol | 31.38 | 30.48 |
| CDY37857 | Canola | cytosol | 33.39 | 30.33 |
| CDX84827 | Canola | cytosol | 31.38 | 30.27 |
| CDY10743 | Canola | cytosol | 32.11 | 30.12 |
| CDY18660 | Canola | cytosol | 29.17 | 30.11 |
| CDY29723 | Canola | cytosol | 38.17 | 29.84 |
| CDY12841 | Canola | cytosol | 32.84 | 29.68 |
| CDY57436 | Canola | cytosol | 32.84 | 29.68 |
| CDX85365 | Canola | cytosol | 33.76 | 29.68 |
| CDX86278 | Canola | cytosol | 33.76 | 29.68 |
| CDY02075 | Canola | cytosol | 31.56 | 29.66 |
| CDY30615 | Canola | cytosol | 26.97 | 29.46 |
| CDY57361 | Canola | cytosol | 26.79 | 29.26 |
| CDY20341 | Canola | cytosol | 37.98 | 29.15 |
| CDY09561 | Canola | cytosol | 32.29 | 29.14 |
| CDX73937 | Canola | plastid | 31.19 | 29.11 |
| CDY00659 | Canola | plastid | 31.19 | 29.06 |
| CDX89539 | Canola | cytosol | 25.5 | 29.02 |
| CDY02305 | Canola | cytosol | 32.11 | 28.83 |
| CDY38923 | Canola | cytosol | 25.14 | 28.78 |
| CDX89922 | Canola | cytosol | 32.84 | 28.41 |
| CDX84515 | Canola | cytosol | 37.8 | 28.37 |
| CDY18140 | Canola | cytosol | 32.66 | 28.25 |
| CDX81462 | Canola | cytosol | 31.19 | 28.19 |
| CDY18715 | Canola | cytosol | 37.25 | 28.04 |
| CDX72639 | Canola | cytosol | 29.72 | 28.03 |
| CDY52208 | Canola | plastid | 33.21 | 28.02 |
| CDY44035 | Canola | cytosol | 29.54 | 28.0 |
| CDX83620 | Canola | cytosol | 28.07 | 27.97 |
| CDY22422 | Canola | cytosol | 29.36 | 27.83 |
| CDY37223 | Canola | cytosol | 30.64 | 27.69 |
| CDY50369 | Canola | cytosol | 26.05 | 27.68 |
| CDY29566 | Canola | cytosol | 29.17 | 27.51 |
| CDY32492 | Canola | cytosol | 32.11 | 27.43 |
| CDX81221 | Canola | cytosol | 36.7 | 27.4 |
| CDY37449 | Canola | cytosol | 24.4 | 27.37 |
| CDX68790 | Canola | cytosol | 28.62 | 27.27 |
| CDY13635 | Canola | cytosol | 28.44 | 27.0 |
| CDX75198 | Canola | cytosol | 28.44 | 26.86 |
| CDX83030 | Canola | plastid | 25.14 | 25.61 |
| CDX96986 | Canola | cytosol | 29.36 | 25.56 |
| CDX69851 | Canola | cytosol | 29.36 | 25.4 |
| CDX77798 | Canola | cytosol | 25.32 | 24.6 |
| CDY17704 | Canola | cytosol | 25.32 | 24.6 |
| GSMUA_Achr3P25690_001 | Banana | nucleus | 43.85 | 20.02 |
| CDY12056 | Canola | plasma membrane | 41.83 | 14.13 |
Protein Annotations
| EnsemblPlants:CDX73781 | EnsemblPlantsGene:GSBRNA2T00109400001 | Gene3D:3.30.710.10 | InterPro:IPR027356 | InterPro:NPH3_dom | InterPro:SKP1/BTB/POZ_sf |
| PANTHER:PTHR32370 | PANTHER:PTHR32370:SF8 | PFAM:PF03000 | PFscan:PS51649 | ProteinID:CDX73781 | ProteinID:CDX73781.1 |
| SEG:seg | SUPFAM:SSF54695 | UniParc:UPI0004EE1217 | UniPathway:UPA00143 | MapMan:35.1 | : |
Description
BnaC08g22220D
Coordinates
chrLK031799:+:2717857..2719910
Molecular Weight (calculated)
61294.8 Da
IEP (calculated)
6.125
GRAVY (calculated)
-0.172
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAEKQSSKG QAWFCSTGLS SDMEVEVDDM TYHLNLNKFL LMSKSRKLHQ LITEQEQNGY TPHIRLENFP GGPEIFEMVV KVCYGVKVNL SASTAVLLRC
101: AAEELEMTEE YSPDNLILKT ENFLSHSVLS NTQETIAALK ACESVSSLAE SIGITKQCID SIVSNKGSTL EVLSEDLLEL SFPIFKRVVQ AMKAKGLSDN
201: IVETSLIRYA KKHIPLITSR SSSSSTIASK NQQRELLETI ISYLPIHNSS ATSTTRSLFG LLRSAIILNT SEKCRTVLEK KIGSHLEKAT LDDLLIPSYS
301: YLNETLYDID LVERLIRHFL ENAAVSLSST SLTVVGKLID GALCEIASDA NLKPERFYIL AVSLPDEARL YDDGLYRAID IYLKSHPRML EVEREKICSV
401: MDFQKLTIEG CTHAAQNERL PLRAVVKVLF LEQLQLRTLV TAVTEEDGGE TAGEAKVYFG VWEEVLKENQ VLRLDMDAMR TRLYHLESEY LNLKEVIAKI
501: DKERLYVANA SPRKWSISNK FGCKFKTQVC DSHESKMVDG RCQRR
101: AAEELEMTEE YSPDNLILKT ENFLSHSVLS NTQETIAALK ACESVSSLAE SIGITKQCID SIVSNKGSTL EVLSEDLLEL SFPIFKRVVQ AMKAKGLSDN
201: IVETSLIRYA KKHIPLITSR SSSSSTIASK NQQRELLETI ISYLPIHNSS ATSTTRSLFG LLRSAIILNT SEKCRTVLEK KIGSHLEKAT LDDLLIPSYS
301: YLNETLYDID LVERLIRHFL ENAAVSLSST SLTVVGKLID GALCEIASDA NLKPERFYIL AVSLPDEARL YDDGLYRAID IYLKSHPRML EVEREKICSV
401: MDFQKLTIEG CTHAAQNERL PLRAVVKVLF LEQLQLRTLV TAVTEEDGGE TAGEAKVYFG VWEEVLKENQ VLRLDMDAMR TRLYHLESEY LNLKEVIAKI
501: DKERLYVANA SPRKWSISNK FGCKFKTQVC DSHESKMVDG RCQRR
001: MANSKKQAWF FYTTGLPSDI EIEVDDITFH LHKFPLMSKS KKLHQLITEQ EQSKVYSHIK LENFPGGSEI FEMVIKISYG FKVDISVSTA VPLRCAAEYL
101: EMTEEYSPEN LISKTEKFLS EFVFTNVQES IKALKACESV SSLAESLCIT EQCIDSIVFQ ASSTDPSSFY GWPINNGGIF TVDRKKQSKD SKTELWFEDL
201: TELSFPIFRR VILSMKSSVL SPEIVERSLL TYAKKHIPGI SRSSSASSSS SSSSTTIASE NQQRELLETI TSDLPLTATT TRSLFGLLRA AIILNASENC
301: RKFLEKKIGS NLEKATLDDL LIPSYSYLNE TLYDIDLVER LLRRFLENVA VSSSSLTVVG RLIDGVLGEI ASDANLKPEQ FYNLAVLLPV QARVYDDGLY
401: RAVDIYFKTH SWILEEEKEK ICSVMDCRKL TVEGCTHAAQ NERLPLRAVV QVLFLEQLQL RQVITGTLLT EEDGDKTVVD LGRWKEAVKE NQVLRLDMDT
501: MRTRVNQLEK ECLYLKKVIA KIDKESLLKA KHGAGKWSIG KKFGCKFSAQ VCDSQEATMV DRRSRRFLS
101: EMTEEYSPEN LISKTEKFLS EFVFTNVQES IKALKACESV SSLAESLCIT EQCIDSIVFQ ASSTDPSSFY GWPINNGGIF TVDRKKQSKD SKTELWFEDL
201: TELSFPIFRR VILSMKSSVL SPEIVERSLL TYAKKHIPGI SRSSSASSSS SSSSTTIASE NQQRELLETI TSDLPLTATT TRSLFGLLRA AIILNASENC
301: RKFLEKKIGS NLEKATLDDL LIPSYSYLNE TLYDIDLVER LLRRFLENVA VSSSSLTVVG RLIDGVLGEI ASDANLKPEQ FYNLAVLLPV QARVYDDGLY
401: RAVDIYFKTH SWILEEEKEK ICSVMDCRKL TVEGCTHAAQ NERLPLRAVV QVLFLEQLQL RQVITGTLLT EEDGDKTVVD LGRWKEAVKE NQVLRLDMDT
501: MRTRVNQLEK ECLYLKKVIA KIDKESLLKA KHGAGKWSIG KKFGCKFSAQ VCDSQEATMV DRRSRRFLS
Arabidopsis Description
BTB/POZ domain-containing protein At3g50840 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.