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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G197100.1
TraesCS2B01G224600.1
TraesCS2D01G205000.1
TraesCS4A01G275400.1
TraesCS4B01G038900.1
TraesCS4D01G035800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G66560.1 TraesCS2A01G197100.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS2B01G224600.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS2D01G205000.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4A01G275400.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4B01G038900.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4D01G035800.1 AT1G03140.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G413400.1 Wheat cytosol 98.22 98.66
TraesCS5B01G408200.1 Wheat cytosol 97.93 98.22
HORVU5Hr1G098170.1 Barley cytosol, mitochondrion 95.56 94.31
Os03t0767600-01 Rice cytosol 84.62 83.75
EER93390 Sorghum cytosol 83.58 83.58
Zm00001d013182_P003 Maize cytosol, mitochondrion 81.66 78.52
GSMUA_Achr8P04840_001 Banana cytosol 46.75 53.74
VIT_00s0207g00230.t01 Wine grape cytosol 50.0 53.23
CDY45241 Canola cytosol 44.97 50.84
Solyc02g090070.2.1 Tomato nucleus 48.82 50.69
KRH08351 Soybean cytosol 48.52 50.62
TraesCS5A01G379300.1 Wheat cytosol, plastid 48.52 50.38
KRH28552 Soybean cytosol 44.08 50.34
PGSC0003DMT400026008 Potato cytosol 48.67 49.92
AT3G50840.1 Thale cress cytosol 41.72 49.56
CDY30765 Canola cytosol 46.15 49.21
CDX73781 Canola cytosol 39.2 48.62
KRH76914 Soybean cytosol 36.39 48.24
CDX77951 Canola cytosol 39.05 48.18
KRH69999 Soybean endoplasmic reticulum 48.22 47.94
AT5G66560.1 Thale cress cytosol 46.89 47.46
Bra036858.1-P Field mustard cytosol 40.24 47.39
Bra012082.1-P Field mustard cytosol 46.89 47.38
TraesCS5A01G042600.1 Wheat cytosol 39.35 42.02
TraesCS7A01G309700.1 Wheat cytosol 38.46 40.44
TraesCS5A01G375500.3 Wheat peroxisome 38.02 39.91
TraesCS3A01G317300.1 Wheat cytosol 35.65 37.13
TraesCS2A01G526900.1 Wheat cytosol 34.17 35.43
TraesCS5A01G146300.1 Wheat plastid 29.44 31.59
TraesCS4A01G192900.1 Wheat cytosol 26.04 31.32
TraesCS4A01G049300.1 Wheat cytosol 27.96 31.09
TraesCS5A01G070700.1 Wheat cytosol 27.96 30.39
TraesCS7A01G184200.2 Wheat plastid 29.73 30.09
TraesCS7A01G149100.1 Wheat cytosol 29.14 30.08
TraesCS4A01G048200.1 Wheat cytosol 26.48 29.54
TraesCS6A01G208800.2 Wheat cytosol 26.92 29.03
TraesCS4A01G236100.1 Wheat cytosol 26.92 28.71
TraesCS6A01G085100.1 Wheat cytosol 30.03 27.77
TraesCS5A01G223800.1 Wheat cytosol 26.33 26.85
TraesCS5A01G171100.1 Wheat cytosol 22.78 26.83
GSMUA_Achr3P25690_001 Banana nucleus 43.34 24.54
Protein Annotations
EnsemblPlants:TraesCS5A01G403400.1EnsemblPlantsGene:TraesCS5A01G403400GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:BTB/POZ_dom
InterPro:IPR000210InterPro:IPR027356InterPro:NPH3_domInterPro:SKP1/BTB/POZ_sfncoils:CoilPANTHER:PTHR32370
PANTHER:PTHR32370:SF8PFAM:PF03000PFscan:PS50097PFscan:PS51649SEG:segSMART:SM00225
SUPFAM:SSF54695MapMan:35.1::::
Description
No Description!
Coordinates
chr5A:+:595894274..595896730
Molecular Weight (calculated)
73240.9 Da
IEP (calculated)
6.193
GRAVY (calculated)
-0.395
Length
676 amino acids
Sequence
(BLAST)
001: MMQGSRRAKG KREMAREEQP QQQHSPKGQA WFCTTGLPSD VVIEVGDMTF HLHKFPLMSK SKKIHDLIMN KESSLARHAG GGEEEGEDEG AGEIREEQVV
101: LEADEEADAH RIRLPDFPGG ADAFELAAKF CYGVKLDLTP ATAAPLRCAA ERLGMSDDHA EDNLVSRADR FMSHTVLRNP RDAIRALKSC EDLLPLADDL
201: GLVSRCVDAI AAKAAASTPT ALFGWPINDA GAGDRPRHKK NAGAGATSTL FDDLAGLSLA TFTRVIAAMR ERGVGPEVLE GALIAYAKRS IPGLSRSDRH
301: TGGGGAAAAA APRSADGDQK ALLETVIVNL PEETIKSSAH TGTAVGATTA RVLFGLLRTA NILQASEASR DMLERRVASR LPDAAVDDLL IPSYSYLVET
401: LYDVDCVERI VRHFLEGRGG GVEEVDEEGS EAETPGREAS RRAMLAVGRL MDAYLGEIAT DANLKTDKFC DLAWALPDGA RVYDDGLYRA VDIYIKAHPA
501: LREEEKEKVS GVVDGRKLTL EACTHAAQNE RLPLRTVVQV LFFEQLQLRR AIARTIVANE GGAAGQGEEE GESDGGRTWR VATRGNQMLR LDMDSMRNRV
601: QELERECTTM RKAIQKIDRR GGAAGDRGAA AAPAAEGRWG SMVTKRFGCK FPAQVCQSQP RSVVARPRRA RIEQSP
Best Arabidopsis Sequence Match ( AT5G66560.1 )
(BLAST)
001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
Arabidopsis Description
BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.