Factsheet for TraesCS6A01G208800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G192300.1	Wheat	cytosol	98.41	98.41
TraesCS6B01G237800.1	Wheat	cytosol	98.25	98.4
HORVU6Hr1G053490.2	Barley	cytosol	96.49	96.49
Zm00001d017079_P001	Maize	cytosol	79.59	79.97
EES05363	Sorghum	cytosol, nucleus, plastid	80.38	78.38
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	77.67	77.67
GSMUA_Achr10P...	Banana	cytosol	50.56	56.31
GSMUA_Achr8P16390_001	Banana	cytosol	45.3	54.41
CDY72257	Canola	cytosol	41.63	51.58
CDY72267	Canola	cytosol	41.63	51.58
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	51.36	51.11
KRH69640	Soybean	cytosol	49.92	49.21
KRG99441	Soybean	cytosol	49.6	49.21
AT1G67900.2	Thale cress	nucleus	49.44	49.13
PGSC0003DMT400047866	Potato	cytosol	48.96	48.89
Bra004064.1-P	Field mustard	cytosol	48.96	48.81
KRH74516	Soybean	cytosol	47.69	48.62
KRH45579	Soybean	nucleus	49.12	48.58
Solyc05g013570.2.1	Tomato	nucleus	47.21	48.52
CDX83620	Canola	cytosol	37.8	43.33
Bra025208.1-P	Field mustard	cytosol	39.08	42.68
CDY13635	Canola	cytosol	39.08	42.68
AT3G26490.3	Thale cress	cytosol	38.76	41.33
TraesCS5A01G070700.1	Wheat	cytosol	35.09	35.37
TraesCS4A01G048200.1	Wheat	cytosol	33.33	34.49
TraesCS4A01G236100.1	Wheat	cytosol	34.61	34.23
TraesCS5A01G171100.1	Wheat	cytosol	30.78	33.62
TraesCS7A01G149100.1	Wheat	cytosol	34.93	33.44
TraesCS5A01G223800.1	Wheat	cytosol	33.17	31.37
TraesCS7A01G309700.1	Wheat	cytosol	30.94	30.17
TraesCS3A01G317300.1	Wheat	cytosol	31.1	30.05
TraesCS2A01G526900.1	Wheat	cytosol	31.1	29.91
TraesCS5A01G042600.1	Wheat	cytosol	29.67	29.38
TraesCS5A01G375500.3	Wheat	peroxisome	29.51	28.73
TraesCS5A01G379300.1	Wheat	cytosol, plastid	29.67	28.57
TraesCS6A01G085100.1	Wheat	cytosol	32.38	27.77
TraesCS4A01G049300.1	Wheat	cytosol	26.32	27.14
TraesCS4A01G192900.1	Wheat	cytosol	24.24	27.05
TraesCS5A01G403400.1	Wheat	cytosol	29.03	26.92
TraesCS5A01G146300.1	Wheat	plastid	26.79	26.67
TraesCS7A01G184200.2	Wheat	plastid	28.07	26.35

Protein Annotations

EnsemblPlants:TraesCS6A01G208800.2	EnsemblPlantsGene:TraesCS6A01G208800	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR32370	PANTHER:PTHR32370:SF33	PFAM:PF03000	PFscan:PS51649	SEG:seg	SUPFAM:SSF54695
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:377178296..377180637

Molecular Weight (calculated)

67983.7 Da

IEP (calculated)

7.793

GRAVY (calculated)

-0.058

Length

627 amino acids

Sequence
(BLAST)

001: MKFMKLGTRP DTFFSSSDSE RSVYTEVATD LQILVGKCLY HLHKFPLLSK CLLLQALCAE SGCGGDGDVI ELAGFPGGAE AFEVCAKFCY GITITVSARN
101: LVPLRCAAAH LGMSEAADRG NLVAKLDSFL ASCLLRRWKD ALAVLHSTRH NVPLCEELGL TSRCVDAVAD LIANPAVAVV PAKSTSASPW WAHDVAELGV
201: DMFWRIMVAV KSTGAVNEKT IGDALKTYAR RWLPNVAKDG LAAEQPFDHA VGASVKQITT RHRLLLEKIV SLLPVDKDAV SCAFLLKLLK AANILSASPA
301: SKAELVRRVA WQLEEASVSD LLIPSVSCMS DMLYDVDAVA AILHEFALRH AAATAPARSP DDNSPGRSDG HRRSRSDESV GFDGARRSSS AAPVSQYALA
401: RVGRLVDTFL MEVAKDPHLP VEKLLAIAEA VPDSARPEHD GLYKVVDSYL KAHPEMSKSA RKRLCRVLNC RRLSEKACSH AAQNELLPLR VVVQVLFFEH
501: ARAAALSGAP VAGELPSNIK ALLSKSGSEE DDADRVDEQR LRALASGASP GDDWSVEGLR RAASKIATLR MKMEEDDEDD EEFVRKAGLS RSASLRFRAF
601: CAMPTGNPKR MLSKLWPLGR SITADRH

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.