CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017079_P001	Maize	cytosol	90.82	93.59
TraesCS6D01G192300.1	Wheat	cytosol	78.69	80.7
TraesCS6B01G237800.1	Wheat	cytosol	78.54	80.67
TraesCS6A01G208800.2	Wheat	cytosol	78.38	80.38
HORVU6Hr1G053490.2	Barley	cytosol	77.76	79.74
EES10995	Sorghum	mitochondrion	63.14	62.08
GSMUA_Achr10P...	Banana	cytosol	48.21	55.06
GSMUA_Achr8P16390_001	Banana	cytosol	42.3	52.11
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	50.39	51.43
CDY72257	Canola	cytosol	40.44	51.38
CDY72267	Canola	cytosol	40.44	51.38
KRH69640	Soybean	cytosol	49.61	50.16
KRH74516	Soybean	cytosol	47.43	49.59
PGSC0003DMT400047866	Potato	cytosol	47.74	48.89
KRG99441	Soybean	cytosol	47.74	48.58
AT1G67900.2	Thale cress	nucleus	47.59	48.49
Solyc05g013570.2.1	Tomato	nucleus	45.88	48.36
Bra004064.1-P	Field mustard	cytosol	47.12	48.17
KRH45579	Soybean	nucleus	47.43	48.11
CDX83620	Canola	cytosol	36.55	42.96
Bra025208.1-P	Field mustard	cytosol	37.95	42.51
CDY13635	Canola	cytosol	37.95	42.51
AT3G26490.3	Thale cress	cytosol	37.64	41.16
OQU93039	Sorghum	cytosol	34.06	35.96
EER91236	Sorghum	cytosol	35.15	35.7
OQU79444	Sorghum	cytosol	34.84	34.78
EER98911	Sorghum	cytosol	32.81	34.09
KXG35200	Sorghum	cytosol	30.17	33.56
EER89339	Sorghum	cytosol	32.66	33.07
EES11510	Sorghum	cytosol	30.64	30.97
EES03716	Sorghum	cytosol	31.1	30.72
EER91175	Sorghum	cytosol	29.7	30.27
OQU91026	Sorghum	cytosol, nucleus, plastid	28.15	30.27
EES14497	Sorghum	cytosol	29.86	29.18
KXG25806	Sorghum	cytosol	28.77	28.29
EER93390	Sorghum	cytosol	28.77	27.37
KXG39906	Sorghum	cytosol	26.13	27.32
EES16593	Sorghum	plastid	27.06	27.02
OQU92601	Sorghum	plastid	26.91	26.17
EES07014	Sorghum	nucleus	30.48	25.36
OQU82741	Sorghum	plastid	22.24	23.75
KXG22914	Sorghum	plastid	25.04	22.55

Protein Annotations

EnsemblPlants:EES05363	EnsemblPlantsGene:SORBI_3004G201300	EntrezGene:8070601	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370	PANTHER:PTHR32370:SF33	PFAM:PF03000	PFscan:PS51649	ProteinID:EES05363
ProteinID:EES05363.1	RefSeq:XP_002452387.1	SEG:seg	SUPFAM:SSF54695	unigene:Sbi.3390	UniParc:UPI0001A85248
UniProt:C5XWI8	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:55299576..55302358

Molecular Weight (calculated)

68981.7 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.013

Length

643 amino acids

Sequence
(BLAST)

001: MKFMKLGTRP DTFFTADSVR SVCTEVATDL QILVDNCIYH LHKFPLLSKC MLLQALCADA GDVVELPGFP GGAEAFEACA KYCYGITITV SARNLVPLRC
101: AAAHLGMSEA ADRGNLAAKL DAFLASCLLR RWKDALGVLH STRHYAPLCE DLGLTSRCVD AVAALIVSPD TALPAKSSTS ASPWWAHDIA ELGVDLFWRI
201: MVAVKATGAV HEKTVGDALK AYARRWLPNV AKDGLSLSAD QPFDDHDAGS ATDVKQVTTR HRLLLEKIVS LLPAERDAVS CGFLLKLLKA ANILSASPAS
301: KLELVRRVAW QLEEASVADL LVPSLSCVSE TLYDVDAVSA ILDEFALRCA AVPPAPPAAL ALSGSPDDDS SAHSGGHRRS RSAESVSFDG TRRSLSAAPV
401: SQGALVQVGK LVDGFLIEVA KDPNMPLDKL LAIAEAVPDS ARPEHDGVYK VVDTYLKAHP EMSKSGRKRL CRLLNCRKLS EKACTHAAQN ELLPLRVVVQ
501: VLFFEHARAA ALASGGGHAA VAATADLPSN IRALLSNKSG SSEDEEADRV DEQRLRALAA GGSPGDDWSV EGLRRAASKI ATLRMKLAED EDYEDRDADE
601: FARKARLARS ASLRFRAFCA IPAGKPKRML SKLWPLGRSG VSH

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.