CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019944_P001	Maize	cytosol	89.1	88.64
TraesCS5A01G171100.1	Wheat	cytosol	75.95	76.48
TraesCS5D01G175800.1	Wheat	cytosol	76.12	75.73
TraesCS5B01G168600.3	Wheat	cytosol	75.78	73.0
Os09t0266600-01	Rice	cytosol	50.87	70.67
HORVU0Hr1G012710.2	Barley	cytosol, plastid	62.8	62.37
GSMUA_Achr3P12020_001	Banana	cytosol	54.15	57.33
GSMUA_Achr3P14590_001	Banana	cytosol	55.88	56.37
VIT_00s0194g00080.t01	Wine grape	cytosol	47.92	46.71
KRH01932	Soybean	cytosol	47.06	46.5
KRH51214	Soybean	cytosol	46.71	45.61
Bra024915.1-P	Field mustard	cytosol	44.12	45.45
CDX77798	Canola	cytosol	44.12	45.45
CDY17704	Canola	cytosol	44.12	45.45
KRH36642	Soybean	cytosol	46.19	44.57
KRH11633	Soybean	cytosol	46.37	44.44
KRH62777	Soybean	cytosol	21.11	38.73
AT5G47800.2	Thale cress	cytosol	43.6	37.5
KRG90163	Soybean	cytosol	28.55	34.38
OQU93039	Sorghum	cytosol	36.16	34.32
EER91236	Sorghum	cytosol	34.95	31.91
EER98911	Sorghum	cytosol	34.08	31.83
OQU79444	Sorghum	cytosol	34.95	31.37
EER89339	Sorghum	cytosol	33.74	30.71
EES05363	Sorghum	cytosol, nucleus, plastid	33.56	30.17
EES10995	Sorghum	mitochondrion	31.83	28.13
EES11510	Sorghum	cytosol	30.1	27.36
EES14497	Sorghum	cytosol	31.14	27.36
EER91175	Sorghum	cytosol	29.58	27.1
KXG25806	Sorghum	cytosol	29.76	26.3
EES03716	Sorghum	cytosol	28.72	25.5
KXG39906	Sorghum	cytosol	26.12	24.55
EES07014	Sorghum	nucleus	31.83	23.8
EES16593	Sorghum	plastid	26.47	23.76
OQU91026	Sorghum	cytosol, nucleus, plastid	24.39	23.58
OQU92601	Sorghum	plastid	26.47	23.15
EER93390	Sorghum	cytosol	25.61	21.89
OQU82741	Sorghum	plastid	19.55	18.77
KXG22914	Sorghum	plastid	21.97	17.79

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8063425	UniProt:A0A1B6QB97	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	ProteinID:KXG35198.1	ProteinID:KXG35199.1
EnsemblPlants:KXG35200	ProteinID:KXG35200	ProteinID:KXG35200.1	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF19	InterPro:SKP1/BTB/POZ_sf	EnsemblPlantsGene:SORBI_3002G145500
SUPFAM:SSF54695	unigene:Sbi.17479	UniParc:UPI00081AE654	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:27836467..27842963

Molecular Weight (calculated)

63647.3 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.188

Length

578 amino acids

Sequence
(BLAST)

001: MKYMKLGTKP DTFHTEEAVR SVVSDIPADL IIHVNNTKYQ LHKFPLLLKC GLLQRLCSDT DDGDEEPVPV ALHDIPGGEE AFELCAKFCY GISISISAGN
101: MVSAMLAARF LRMTEVVAKG NLVAKLQTFF DSCVLLGWKD TVAALQAAWQ ISGWSESRIV QPCIDSVVEK ILMPPSKVTW SYTYTRPGYN TRKPHQSVPK
201: DWWTEDISEL DIEVFRSVIC TVRASSQLPP PLIGEALHVY ACKHLVDPLH VGSSGVLHQA PQTSAAAEET LVAKQRRVVE SIVTMIPSET GSVTGRFLLR
301: LLRVANYVSA SSSTRAQLIR QAASQLNEAR AADLLIPLPS DPETYDVGAL EAVLEHFLAQ FQRPAAAEER RRMSATMTKV ARIFDEYLQT IALDRDFPVG
401: KFVHLVECLP DIARSDHDGL YYAIDIYLKE HPELSKADKK RLCRLIDCRK MSPDVRAQAI ANDRLPLRTI VQLLFVEQER TIGAAAGGSN AADGGAGDRA
501: SVGVISQLAA RTKDEEPASS AVHKSDDAHI PRRDHTRVAD GTAAAAMTRS LSVSTNTPPV ARKERTPEET GSRMRNKQ

Best Arabidopsis Sequence Match ( AT5G47800.3 )
(BLAST)

001: MKFMKIGTKP DTFYTQEASR ILITDTPNDL VIRINNTTYH LHRSCLVPKC GLLRRLCTDL EESDTVTIEL NDIPGGADAF ELCAKFCYDI TINLSAHNLV
101: NALCASKFLR MSDSVDKGNL LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENLGIVR KCIDSIVEKI LTPTSEVSWS HTYTRPGYAK RQHHSVPRDW
201: WTEDISDLDL DLFRCVITAA RSTFTLPPQL IGEALHVYTC RWLPYFKSNS HSGFSVKENE AALERHRRLV NTVVNMIPAD KGSVSEGFLL RLVSIASYVR
301: ASLTTKTELI RKSSLQLEEA TLEDLLLPSH SSSHLHRYDT DLVATVLESF LMLWRRQSSA HLSSNNTQLL HSIRKVAKLI DSYLQAVAQD VHMPVSKFVS
401: LSEAVPDIAR QSHDRLYKAI NIFLKVHPEI SKEEKKRLCR SLDCQKLSAQ VRAHAVKNER MPLRTVVQAL FFDQESGSKG ASSRSESQEL FTRGKETPTD
501: EHSMMHKLHL GPASTGKAKN VLEEGCKRGE EKTRSSTDPK KIVWKGTGSE HKHHISRDR

Arabidopsis Description

Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G47800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.