CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045098_P001	Maize	cytosol	89.92	89.64
Os06t0184500-00	Rice	cytosol	80.94	79.81
TraesCS7B01G052800.1	Wheat	cytosol	72.28	70.29
TraesCS7A01G149100.1	Wheat	cytosol	72.44	70.23
TraesCS7D01G150700.2	Wheat	cytosol	71.81	69.72
HORVU7Hr1G030460.8	Barley	cytosol	70.39	67.73
GSMUA_Achr4P01950_001	Banana	cytosol	41.89	65.2
GSMUA_Achr3P04740_001	Banana	cytosol	55.43	59.66
HORVU7Hr1G097110.6	Barley	cytosol	49.29	57.75
EER98911	Sorghum	cytosol	55.91	57.35
VIT_04s0008g06630.t01	Wine grape	cytosol	55.91	57.26
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	56.85	55.62
KRH05372	Soybean	cytosol	53.39	55.03
KRH15648	Soybean	cytosol	53.23	54.96
PGSC0003DMT400022573	Potato	cytosol	51.5	53.17
CDX68790	Canola	cytosol	47.72	52.97
Solyc08g006870.2.1	Tomato	cytosol	51.18	52.85
AT4G31820.1	Thale cress	cytosol	47.4	52.71
KRH52322	Soybean	cytosol	50.08	52.05
Bra011301.1-P	Field mustard	cytosol	46.93	51.65
CDX75198	Canola	cytosol	46.93	51.65
KRH61660	Soybean	cytosol	48.19	48.49
EER91236	Sorghum	cytosol	45.51	45.66
OQU93039	Sorghum	cytosol	42.68	44.5
OQU79444	Sorghum	cytosol	44.88	44.25
KXG35200	Sorghum	cytosol	30.71	33.74
EER91175	Sorghum	cytosol	32.6	32.81
EES05363	Sorghum	cytosol, nucleus, plastid	33.07	32.66
EES10995	Sorghum	mitochondrion	32.28	31.35
EES14497	Sorghum	cytosol	32.44	31.31
EES03716	Sorghum	cytosol	31.02	30.26
EES11510	Sorghum	cytosol	29.92	29.87
KXG25806	Sorghum	cytosol	30.08	29.2
EES07014	Sorghum	nucleus	34.49	28.33
OQU91026	Sorghum	cytosol, nucleus, plastid	26.46	28.09
EER93390	Sorghum	cytosol	29.13	27.37
KXG39906	Sorghum	cytosol	25.67	26.5
EES16593	Sorghum	plastid	26.3	25.93
OQU92601	Sorghum	plastid	26.93	25.87
OQU82741	Sorghum	plastid	22.05	23.26
KXG22914	Sorghum	plastid	22.36	19.89

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8065419	InterPro:BTB/POZ_dom	UniProt:C5Z5J0	EnsemblPlants:EER89339
ProteinID:EER89339	ProteinID:EER89339.1	GO:GO:0003674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0009987
GO:GO:0060918	GO:GO:0099402	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF75	InterPro:SKP1/BTB/POZ_sf
EnsemblPlantsGene:SORBI_3010G066100	SUPFAM:SSF54695	UniParc:UPI0001A89733	RefSeq:XP_002437972.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:5269105..5273618

Molecular Weight (calculated)

69786.6 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.124

Length

635 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DAFQTDGSDA RYVLSDLPSD IVIHVEDARF YLHKFPLLCK SSLLQRLIIE ASQNGTDEVV IQDIPGGVKT FEICAKFCYG MVVTLNAYNV
101: VAARCAAEYL GMTEDVEKSN LIFKIEVFLN SGIFRSWKDS IIALQTTDAL LPWSEELKLV GRCIDSIATK ATVNPSNVMW SYTYNRKSAS SDEIVEARKS
201: SQAVPKDWWV EDLCELDVDL YRRVMVAVKS RGRIPSDVVG EALKAYAARW LPECCDMLAE DAYSEAYKHL LETIVWLLPS DKGSSGISCC FFLKLLKVTV
301: LIGAGELLKE ELVDRIVLQL HKASVNDLLI PSKPPAQTVY DVQLVQTLIS RYMSHAGVAQ DGIFLNNLDQ EMFETNVDSE SLLALCKLVD RYIAEVASDP
401: NLSVSSFVDL VTSMPETARP THDGLYTAID VFLKLHPGLP KMEKRKISSL MDVKKLSKGA CIHAAQNDRL PLRVVVQVLF FEQLRAAGAA AAATPNVSVA
501: RCMARLAEEE EEDDHEHWKE GRALPEPPTP GALKRQLGSL KLGGDGDDGR RLVARSSSVA NQSSRLSLSS RSRRIFDRLW VGGSAKLPGE AAATAAVGKG
601: SSDTSGSSQS PRSSAKPLES KSSSSSSRNR RYSVS

Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)

001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S

Arabidopsis Description

NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.