Factsheet for PGSC0003DMT400022573

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g006870.2.1	Tomato	cytosol	96.75	96.75
VIT_04s0008g06630.t01	Wine grape	cytosol	74.96	74.35
KRH05372	Soybean	cytosol	68.62	68.51
GSMUA_Achr4P01950_001	Banana	cytosol	45.2	68.14
KRH15648	Soybean	cytosol	67.8	67.8
KRH52322	Soybean	cytosol	65.69	66.12
KRH61660	Soybean	cytosol	64.39	62.76
GSMUA_Achr3P04740_001	Banana	cytosol	60.16	62.71
AT4G31820.1	Thale cress	cytosol	56.26	60.6
CDX68790	Canola	cytosol	55.12	59.27
Bra011301.1-P	Field mustard	cytosol	54.96	58.58
CDX75198	Canola	cytosol	54.96	58.58
EER98911	Sorghum	cytosol	55.77	55.41
Os09t0420900-01	Rice	cytosol	55.61	55.34
Zm00001d005769_P001	Maize	cytosol	55.77	54.88
HORVU5Hr1G064620.1	Barley	cytosol	55.28	53.38
TraesCS5B01G222700.2	Wheat	cytosol	55.28	53.38
TraesCS5D01G231300.1	Wheat	cytosol	55.12	53.22
Zm00001d020512_P001	Maize	cytosol	55.28	52.39
EER89339	Sorghum	cytosol	53.17	51.5
Zm00001d045098_P001	Maize	cytosol	53.17	51.33
TraesCS5A01G223800.1	Wheat	cytosol	55.28	51.28
Os06t0184500-00	Rice	cytosol	53.66	51.24
TraesCS7A01G149100.1	Wheat	cytosol	53.98	50.69
TraesCS7D01G150700.2	Wheat	cytosol	53.82	50.61
TraesCS7B01G052800.1	Wheat	cytosol	53.5	50.38
HORVU7Hr1G030460.8	Barley	cytosol	51.22	47.73
PGSC0003DMT400064174	Potato	cytosol	48.29	47.29
PGSC0003DMT400038537	Potato	cytosol	47.8	46.89
PGSC0003DMT400013928	Potato	cytosol	46.5	46.89
PGSC0003DMT400066161	Potato	cytosol	46.67	45.85
PGSC0003DMT400047866	Potato	cytosol	42.93	42.04
HORVU7Hr1G097110.6	Barley	cytosol	36.91	41.88
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	42.93	40.68
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	34.96	34.18
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	33.01	33.28
PGSC0003DMT400093531	Potato	cytosol	28.29	32.34
PGSC0003DMT400006173	Potato	cytosol	35.45	32.25
PGSC0003DMT400083737	Potato	cytosol	34.47	32.17
PGSC0003DMT400010359	Potato	cytosol	30.08	32.01
PGSC0003DMT400033866	Potato	cytosol	30.57	31.28
PGSC0003DMT400045508	Potato	cytosol	30.73	31.14
PGSC0003DMT400003100	Potato	cytosol	29.92	30.72
PGSC0003DMT400026008	Potato	cytosol	32.2	30.05
PGSC0003DMT400031245	Potato	cytosol	27.97	29.86
PGSC0003DMT400018688	Potato	cytosol	30.08	29.55
PGSC0003DMT400001154	Potato	cytosol	28.13	27.42
PGSC0003DMT400029528	Potato	cytosol	22.28	26.92
PGSC0003DMT400073584	Potato	cytosol	24.07	26.71

Protein Annotations

EntrezGene:102604689	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY1	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0009987	GO:GO:0060918	GO:GO:0099402	InterPro:IPR000210
InterPro:IPR027356	UniProt:M1AGX8	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	EnsemblPlantsGene:PGSC0003DMG400008751
PGSC:PGSC0003DMG400008751	EnsemblPlants:PGSC0003DMT400022573	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF7
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI000294C01B	RefSeq:XP_006362513.1	SEG:seg

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400008751]

Coordinates

chr8:-:1409131..1415940

Molecular Weight (calculated)

69025.4 Da

IEP (calculated)

9.013

GRAVY (calculated)

-0.256

Length

615 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DTFQDQGKSI RYVSSELATD VTIIVGEVIF YLHKFPLLSM SNRLQKLVSK ANEENSDVIQ LVDFPGGPKA FENCAKFCYG MTVTLNPYNV
101: VAARCAAEYL EMTEEVDRGN LIFKIEVFLN SSVFRSWKDS IIVLQTTKSL QPWSEDLKVV GRCIDSIASK TSMDPLSITW SYTYNRKVAV SDKITEVGMK
201: FPGKLESVPK DWWVEDICEL EIDLYKRVMV AVKSKGRMDG SVIGEALRTY AMRWLPDSIE ALVSEAHSIR NKSLLETIIC LLPSDKGVTC SCSFLLKLLK
301: VAILVGADDS SRDELVKGIS LKLDEASVND LLIPARSPQA TVYDVELVKC LVNRFMARER SSRDKNIPPK STNDFILGHA SWLKVGKLID GYLAEIARDP
401: NVSLSIFIEL LQSIPDSARP IHDALYEAID IYLQEHSSLT KAEKKHLCSL MDVRKLTMDA SIHAAQNERL PLRTVVQVLF FEQIRAAAGV QTLNHRNTDA
501: VDFTRMTEKE YWQKTLPEKQ TVSKPSSEIK IKGEDPQKNM KLVKKGSKNR SSGPQLMPSR SRRIFDKLFI GKVSGNGENR SSETSGSSQS PTLRIIQGEM
601: KSSCTSSRNR RNSIS

Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)

001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S

Arabidopsis Description

NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.