Factsheet for PGSC0003DMT400066161

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g107180.2.1	Tomato	cytosol	96.49	96.49
PGSC0003DMT400013928	Potato	cytosol	76.36	78.36
VIT_03s0091g00680.t01	Wine grape	cytosol	72.04	72.28
KRH35678	Soybean	cytosol	70.29	70.51
KRG91101	Soybean	mitochondrion	66.93	66.51
CDX81462	Canola	cytosol	62.78	65.17
CDY37223	Canola	cytosol	62.62	65.01
Bra039820.1-P	Field mustard	cytosol	65.02	64.91
PGSC0003DMT400064174	Potato	cytosol	64.22	64.01
CDY50369	Canola	cytosol	52.24	63.74
AT2G14820.2	Thale cress	cytosol	63.1	62.3
PGSC0003DMT400038537	Potato	cytosol	61.02	60.92
GSMUA_Achr4P10900_001	Banana	cytosol	52.88	59.43
GSMUA_Achr5P01710_001	Banana	cytosol	54.63	58.86
EER91236	Sorghum	cytosol	59.42	58.77
TraesCS4A01G236100.1	Wheat	cytosol	58.95	58.2
Zm00001d013741_P001	Maize	cytosol	59.74	58.16
TraesCS4B01G078900.3	Wheat	cytosol	58.79	58.04
Zm00001d033344_P001	Maize	cytosol	58.79	57.95
TraesCS4D01G077700.3	Wheat	cytosol	58.31	57.57
Os03t0609800-02	Rice	cytosol	57.99	57.26
Os12t0583500-01	Rice	cytosol, plasma membrane	57.67	56.58
TraesCS5B01G076500.1	Wheat	cytosol	55.91	56.36
OQU93039	Sorghum	cytosol	54.79	56.32
TraesCS5D01G082800.1	Wheat	cytosol	55.27	55.63
TraesCS5A01G070700.1	Wheat	cytosol	55.27	55.63
OQU79444	Sorghum	cytosol	56.87	55.28
Os03t0205700-01	Rice	cytosol	53.19	55.04
HORVU5Hr1G018480.1	Barley	cytosol	54.95	54.6
Zm00001d030864_P001	Maize	cytosol	55.75	54.45
TraesCS4B01G256600.1	Wheat	cytosol	52.56	54.38
TraesCS4A01G048200.1	Wheat	cytosol	52.4	54.13
TraesCS4D01G256700.1	Wheat	cytosol	52.4	54.13
HORVU4Hr1G069760.10	Barley	cytosol	52.88	54.09
Zm00001d048138_P007	Maize	cytosol	53.51	53.69
GSMUA_Achr7P26250_001	Banana	cytosol	53.19	53.37
GSMUA_Achr10P...	Banana	cytosol	48.08	52.9
GSMUA_Achr2P13430_001	Banana	cytosol	55.59	51.86
PGSC0003DMT400022573	Potato	cytosol	45.85	46.67
PGSC0003DMT400047866	Potato	cytosol	44.09	43.95
Zm00001d028075_P010	Maize	endoplasmic reticulum	53.04	41.14
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	34.82	34.66
PGSC0003DMT400083737	Potato	cytosol	36.26	34.45
PGSC0003DMT400006173	Potato	cytosol	37.06	34.32
PGSC0003DMT400045508	Potato	cytosol	31.79	32.78
PGSC0003DMT400003100	Potato	cytosol	30.83	32.22
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	31.31	32.13
PGSC0003DMT400026008	Potato	cytosol	33.23	31.56
PGSC0003DMT400093531	Potato	cytosol	26.36	30.67
PGSC0003DMT400010359	Potato	cytosol	28.27	30.62
PGSC0003DMT400033866	Potato	cytosol	28.43	29.62
PGSC0003DMT400018688	Potato	cytosol	29.55	29.55
PGSC0003DMT400031245	Potato	cytosol	26.52	28.82
PGSC0003DMT400029528	Potato	cytosol	23.0	28.29
PGSC0003DMT400001154	Potato	cytosol	28.11	27.89
PGSC0003DMT400073584	Potato	cytosol	24.28	27.44

Protein Annotations

EntrezGene:102588886	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY2	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628
GO:GO:0009958	InterPro:IPR000210	InterPro:IPR027356	UniProt:M1CF40	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	EnsemblPlantsGene:PGSC0003DMG400025751	PGSC:PGSC0003DMG400025751	EnsemblPlants:PGSC0003DMT400066161	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000295209F	RefSeq:XP_006346315.1
RefSeq:XP_006346316.1	RefSeq:XP_006346317.1	RefSeq:XP_006346318.1	RefSeq:XP_006346319.1	RefSeq:XP_006346320.1	RefSeq:XP_015163726.1
RefSeq:XP_015163727.1	RefSeq:XP_015163728.1	RefSeq:XP_015163729.1	RefSeq:XP_015163730.1	RefSeq:XP_015163731.1	RefSeq:XP_015163732.1
RefSeq:XP_015163733.1	SEG:seg	:	:	:	:

Description

Signal transducer [Source:PGSC_GENE;Acc:PGSC0003DMG400025751]

Coordinates

chr1:+:83688692..83695372

Molecular Weight (calculated)

69018.4 Da

IEP (calculated)

7.179

GRAVY (calculated)

-0.303

Length

626 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DAFQTDGNNV RYVASELASD IAINVGDVKF YLHKFPLLSK SATLQKLVSN ASEGNCNEVD IHDIPGGPSA FEICAKFCYG MTVTLNAYNV
101: ISARCAAEYL GMNESLEKGN LVYKIDVFLN SSIFRSWKDS IIVLQTTKSQ SRMCEELKLT SHCIDAVASR ASVDVSRVDW SYTYNRKKLP EENGNDPNLN
201: GIRSRMVLKD WWVEDLCELE VDLYKRVVIT IKNKGIVSSE VIGEAAKAYA YRRFPGFNKG AFQFNDVSKC RPILDTVVWL LPSEKGSVSC SFLLKLLKAS
301: VSLDSGETLK AELVKRIGQQ LEEASVNDLL IRAADGEGTM YDAHVVQKIL EAFVMRDMDS EPQLEDGDEI QEVRKPGILS EASKLMVAKL VDGYLTEIAK
401: DPNLPLSTFV GLAEMVSNFP RPGHDGIYRA VDMYLKEHPG ISKNERKRIC KLMDCKKLSV DACMHAVQNE RLPLRVVVQV LFFEQVRANA SSGSSTPDLP
501: KAIRDLNSAS YGSSRSATTN TEEDWDAAAS AEELRALRGE LAALRMGNGG TNDKVNVIDA KSHADRAAMS KMKGLLMSKR LFSKIWSNKG GQGENSGSDS
601: SESLGSANNL EEAKSTPSRK GRHSVS

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.