Factsheet for PGSC0003DMT400038537

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g044090.2.1	Tomato	cytosol	94.26	93.81
PGSC0003DMT400064174	Potato	cytosol	76.08	75.96
VIT_07s0129g00250.t01	Wine grape	cytosol	69.86	69.63
KRH58085	Soybean	cytosol	65.87	66.19
KRH04439	Soybean	cytosol	66.35	66.14
KRH58082	Soybean	cytosol	66.19	66.08
KRH04442	Soybean	cytosol	64.91	64.6
CDX81314	Canola	cytosol	51.67	61.6
Bra037846.1-P	Field mustard	cytosol	51.2	61.03
PGSC0003DMT400066161	Potato	cytosol	60.92	61.02
CDY18660	Canola	cytosol	51.36	60.98
AT2G23050.1	Thale cress	cytosol	45.45	59.25
CDX89539	Canola	cytosol	44.82	58.66
PGSC0003DMT400013928	Potato	cytosol	56.94	58.52
Bra032187.1-P	Field mustard	cytosol	44.66	58.46
CDY38923	Canola	cytosol	44.02	57.98
CDY69095	Canola	cytosol	51.36	57.4
Bra012166.1-P	Field mustard	cytosol	51.52	57.37
GSMUA_Achr4P10900_001	Banana	cytosol	50.88	57.27
CDY22422	Canola	cytosol	52.15	56.87
Bra010603.1-P	Field mustard	cytosol	51.99	56.7
AT4G37590.1	Thale cress	cytosol	52.31	56.55
CDY44035	Canola	cytosol	51.83	56.52
AT5G67440.1	Thale cress	cytosol	52.15	56.48
CDX72639	Canola	cytosol	51.99	56.4
CDY12846	Canola	cytosol	50.72	56.28
GSMUA_Achr5P01710_001	Banana	cytosol	52.15	56.28
EER91236	Sorghum	cytosol	56.78	56.24
CDY29566	Canola	cytosol	51.36	55.71
Bra017837.1-P	Field mustard	cytosol	51.2	55.54
TraesCS4A01G236100.1	Wheat	cytosol	56.14	55.52
TraesCS4B01G078900.3	Wheat	cytosol	55.98	55.36
Zm00001d033344_P001	Maize	cytosol	55.82	55.12
Os03t0609800-02	Rice	cytosol	55.66	55.05
Zm00001d013741_P001	Maize	cytosol	56.3	54.9
Os12t0583500-01	Rice	cytosol, plasma membrane	55.82	54.86
TraesCS4D01G077700.3	Wheat	cytosol	55.18	54.57
TraesCS5B01G076500.1	Wheat	cytosol	53.59	54.11
GSMUA_Achr10P...	Banana	cytosol	48.8	53.78
TraesCS4B01G256600.1	Wheat	cytosol	51.83	53.72
TraesCS5D01G082800.1	Wheat	cytosol	53.27	53.7
TraesCS5A01G070700.1	Wheat	cytosol	53.27	53.7
TraesCS4D01G256700.1	Wheat	cytosol	51.83	53.63
OQU93039	Sorghum	cytosol	51.83	53.37
TraesCS4A01G048200.1	Wheat	cytosol	51.52	53.3
Os03t0205700-01	Rice	cytosol	51.04	52.89
HORVU5Hr1G018480.1	Barley	cytosol	53.11	52.86
HORVU4Hr1G069760.10	Barley	cytosol	51.36	52.61
GSMUA_Achr7P26250_001	Banana	cytosol	51.83	52.08
OQU79444	Sorghum	cytosol	53.43	52.02
GSMUA_Achr2P13430_001	Banana	cytosol	54.86	51.27
Zm00001d030864_P001	Maize	cytosol	52.31	51.17
Zm00001d048138_P007	Maize	cytosol	50.56	50.8
PGSC0003DMT400022573	Potato	cytosol	46.89	47.8
PGSC0003DMT400047866	Potato	cytosol	41.95	41.88
Zm00001d028075_P010	Maize	endoplasmic reticulum	51.36	39.9
PGSC0003DMT400083737	Potato	cytosol	37.64	35.81
PGSC0003DMT400006173	Potato	cytosol	37.8	35.06
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	34.93	34.82
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	33.33	34.26
PGSC0003DMT400093531	Potato	cytosol	28.07	32.71
PGSC0003DMT400045508	Potato	cytosol	31.26	32.29
PGSC0003DMT400003100	Potato	cytosol	30.78	32.22
PGSC0003DMT400026008	Potato	cytosol	32.22	30.65
PGSC0003DMT400010359	Potato	cytosol	28.23	30.62
PGSC0003DMT400029528	Potato	cytosol	24.4	30.06
PGSC0003DMT400031245	Potato	cytosol	27.27	29.69
PGSC0003DMT400018688	Potato	cytosol	28.87	28.91
PGSC0003DMT400073584	Potato	cytosol	25.36	28.7
PGSC0003DMT400033866	Potato	cytosol	27.27	28.45
PGSC0003DMT400001154	Potato	cytosol	27.91	27.73

Protein Annotations

EntrezGene:102587555	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	UniProt:M1B719	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	EnsemblPlantsGene:PGSC0003DMG400014877	PGSC:PGSC0003DMG400014877	EnsemblPlants:PGSC0003DMT400038537	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF26	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000294B3DB	RefSeq:XP_006343206.1
RefSeq:XP_006343207.1	RefSeq:XP_015162326.1	SEG:seg	:	:	:

Description

BZIP domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400014877]

Coordinates

chr3:+:7101306..7106258

Molecular Weight (calculated)

70098.6 Da

IEP (calculated)

7.613

GRAVY (calculated)

-0.320

Length

627 amino acids

Sequence
(BLAST)

001: MKYMKLGSKP DQFQTEGDSI RYVAAELATD MVINVGDVKF YLHKFPLLLK SYRLQKLIAC TNEENSDKIN IHDIPGGPAA FEVCAKFCYN MTVTLNAYNV
101: VAARCAAEYL EMYESVEKGN LIYKIEVFLT SSIFRSWKDS IIVLQTTKAF LPWSEELKIV SHCLESVASK ASVDTSKVDW SYTYNHKKLP SENGSDLHCN
201: AVSWQQLVPI DWWVEDLCEL HIDLYKRVIV TIKSKGRISS EAIGEALKAY ANRRLPGFSK GSIQGSDPEK YRYMVDTISW LLPKEKNSVS CSFLIKLLQT
301: SIAFECGQTT RSELKRRIGL HMEDATVGDL LIRAPDSETI IFDIDIVHDL VENFMLHQKS SQIDSSADNR FHDICPTFAS DASEVKMARV IDGYLAEVAR
401: DPNLPLSKFI NLAELVSSFS RPSHDGIYRA IDMYLKEHPG ITKSERKRIC RLMDCRKLSA EACMHAVQNE RLPLRVVVQV LFFEQLRATA SSGGGSTPDL
501: TRSVKSLLPV GSQRCSTSAT SNIEDNPDAV LTAKELKALK GELAALRLRD RGDNNCSNLN DTKTNAATVD DSKVRSSIMS KKMLSKLWSN KERQSENSSS
601: DTSESPSSSN AGETKSTSCR SGRHSLS

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.