Factsheet for PGSC0003DMT400064174

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g092480.2.1	Tomato	cytosol	97.93	97.93
PGSC0003DMT400038537	Potato	cytosol	75.96	76.08
VIT_07s0129g00250.t01	Wine grape	cytosol	74.2	74.09
KRH58085	Soybean	cytosol	68.15	68.59
KRH04439	Soybean	cytosol	68.47	68.36
KRH58082	Soybean	cytosol	66.24	66.24
KRH04442	Soybean	cytosol	65.76	65.56
CDX81314	Canola	cytosol	54.14	64.64
PGSC0003DMT400066161	Potato	cytosol	64.01	64.22
Bra037846.1-P	Field mustard	cytosol	52.71	62.93
CDY18660	Canola	cytosol	52.87	62.88
Bra032187.1-P	Field mustard	cytosol	46.66	61.17
AT2G23050.1	Thale cress	cytosol	46.82	61.12
CDX89539	Canola	cytosol	46.5	60.96
CDY38923	Canola	cytosol	46.02	60.71
Bra012166.1-P	Field mustard	cytosol	54.3	60.57
CDY69095	Canola	cytosol	53.98	60.43
EER91236	Sorghum	cytosol	60.83	60.35
PGSC0003DMT400013928	Potato	cytosol	58.6	60.33
AT5G67440.1	Thale cress	cytosol	55.57	60.28
CDY22422	Canola	cytosol	55.1	60.17
AT4G37590.1	Thale cress	cytosol	55.41	60.0
Bra010603.1-P	Field mustard	cytosol	54.94	60.0
TraesCS4B01G078900.3	Wheat	cytosol	60.51	59.94
CDY44035	Canola	cytosol	54.78	59.83
CDY12846	Canola	cytosol	53.82	59.82
TraesCS4A01G236100.1	Wheat	cytosol	60.35	59.78
Zm00001d033344_P001	Maize	cytosol	59.87	59.21
CDY29566	Canola	cytosol	54.46	59.17
CDX72639	Canola	cytosol	54.46	59.17
Bra017837.1-P	Field mustard	cytosol	54.3	59.0
TraesCS4D01G077700.3	Wheat	cytosol	59.55	58.99
GSMUA_Achr5P01710_001	Banana	cytosol	54.46	58.86
Os03t0609800-02	Rice	cytosol	59.39	58.83
GSMUA_Achr4P10900_001	Banana	cytosol	51.11	57.63
Os12t0583500-01	Rice	cytosol, plasma membrane	58.44	57.52
Zm00001d013741_P001	Maize	cytosol	58.76	57.39
TraesCS5B01G076500.1	Wheat	cytosol	56.05	56.68
TraesCS5A01G070700.1	Wheat	cytosol	55.89	56.43
TraesCS5D01G082800.1	Wheat	cytosol	55.73	56.27
Os03t0205700-01	Rice	cytosol	53.82	55.87
TraesCS4B01G256600.1	Wheat	cytosol	53.5	55.54
TraesCS4D01G256700.1	Wheat	cytosol	53.5	55.45
HORVU5Hr1G018480.1	Barley	cytosol	55.57	55.4
TraesCS4A01G048200.1	Wheat	cytosol	53.34	55.28
OQU93039	Sorghum	cytosol	53.5	55.17
GSMUA_Achr10P...	Banana	cytosol	49.84	55.01
HORVU4Hr1G069760.10	Barley	cytosol	53.18	54.58
OQU79444	Sorghum	cytosol	55.73	54.35
GSMUA_Achr7P26250_001	Banana	cytosol	52.87	53.21
GSMUA_Achr2P13430_001	Banana	cytosol	56.85	53.2
Zm00001d048138_P007	Maize	cytosol	52.71	53.04
Zm00001d030864_P001	Maize	cytosol	53.18	52.11
PGSC0003DMT400022573	Potato	cytosol	47.29	48.29
PGSC0003DMT400047866	Potato	cytosol	43.79	43.79
Zm00001d028075_P010	Maize	endoplasmic reticulum	52.23	40.64
PGSC0003DMT400006173	Potato	cytosol	38.85	36.09
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	35.67	35.61
PGSC0003DMT400083737	Potato	cytosol	37.26	35.51
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	32.96	33.93
PGSC0003DMT400093531	Potato	cytosol	28.5	33.27
PGSC0003DMT400045508	Potato	cytosol	32.01	33.11
PGSC0003DMT400003100	Potato	cytosol	31.53	33.06
PGSC0003DMT400026008	Potato	cytosol	32.64	31.11
PGSC0003DMT400010359	Potato	cytosol	28.18	30.62
PGSC0003DMT400029528	Potato	cytosol	23.89	29.47
PGSC0003DMT400018688	Potato	cytosol	29.14	29.23
PGSC0003DMT400031245	Potato	cytosol	26.11	28.47
PGSC0003DMT400073584	Potato	cytosol	24.68	27.98
PGSC0003DMT400033866	Potato	cytosol	26.75	27.95
PGSC0003DMT400001154	Potato	cytosol	28.03	27.89

Protein Annotations

EntrezGene:102589934	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	UniProt:M1CBV0	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	EnsemblPlantsGene:PGSC0003DMG400024933	PGSC:PGSC0003DMG400024933	EnsemblPlants:PGSC0003DMT400064174	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF26	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000296B084	RefSeq:XP_015168295.1
RefSeq:XP_015168298.1	RefSeq:XP_015168299.1	RefSeq:XP_015168305.1	RefSeq:XP_015168308.1	RefSeq:XP_015168313.1	SEG:seg

Description

BZIP domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400024933]

Coordinates

chr2:+:42924220..42929552

Molecular Weight (calculated)

70282.8 Da

IEP (calculated)

7.269

GRAVY (calculated)

-0.378

Length

628 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DQFQTKGDNI RYVATELATD MVINVGDVKF YLHKFPLLSK SFRLQKLTAN TNEENNDEIN IDDIPGGPAA FEICAKFCYG MTVTLNAYNV
101: VAARCAAEYL EMYETVEKGN IIYKLEVFLT SSIFRSWKDS IIVLQTTKVF LPWSEELKIV SHCLDSVASK AYIDTSKVDW SYTYNRKKLP SENGSDPLWN
201: GVQKQQYVPR DWWVEDLSEL HIDLYKRVIT TIKTKGGMSP EVIGEALRAY AYRRLPGFSK GKIPGSDPVK YQYLVDMITS LLPTEKHSVS CSFLIRLLQT
301: SVSLECGETV QSELKRRIGQ HLDEASVADL LLRAPANETT TYDVDTVHEL VQQFMLQKRS GRSDFPEDNE FQEMYPAFAS DSSKVKVARV IDGYLAEVSR
401: DPNLPLVKFV NLAEMVSGFP RPSHDGIYRA IDMYLKEHLG ITKSERKRIC KLMDCRKLSA EACMHAVQNE RLPLRVVVQV LFFEQARATT SSGGGSTPDL
501: AGTIKSLLPG ESHGSSRSAT TNTDEDWDAV PTAEELKALK GELATLRLTD KEVGCNDTNS IDIKMSVEKV IGGKAKGLIM SKKLFSKLWS NKDRLSENSS
601: SDTSESPGSS NAGESKSTPS RSRRHSLS

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.