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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017837.1-P Field mustard cytosol 99.83 99.83
CDX72639 Canola cytosol 96.89 96.89
CDY44035 Canola cytosol 88.06 88.52
CDY22422 Canola cytosol 87.72 88.17
AT4G37590.1 Thale cress cytosol 86.85 86.55
CDY38923 Canola cytosol 55.36 67.23
CDX89539 Canola cytosol 54.67 65.97
CDX81314 Canola cytosol 53.98 59.32
CDY18660 Canola cytosol 53.81 58.9
CDY69095 Canola cytosol 54.67 56.33
VIT_07s0129g00250.t01 Wine grape cytosol 60.21 55.33
CDY12846 Canola cytosol 53.98 55.22
Solyc02g092480.2.1 Tomato cytosol 59.34 54.62
PGSC0003DMT400064174 Potato cytosol 59.17 54.46
KRH04439 Soybean cytosol 58.82 54.05
KRH58085 Soybean cytosol 58.13 53.85
KRH58082 Soybean cytosol 57.27 52.71
GSMUA_Achr5P01710_001 Banana cytosol 52.25 51.98
KRH04442 Soybean cytosol 56.06 51.43
PGSC0003DMT400038537 Potato cytosol 55.71 51.36
Solyc03g044090.2.1 Tomato cytosol 54.84 50.32
GSMUA_Achr4P10900_001 Banana cytosol 48.27 50.09
Os03t0205700-01 Rice cytosol 50.87 48.59
TraesCS5D01G082800.1 Wheat cytosol 52.25 48.55
EER91236 Sorghum cytosol 53.11 48.5
TraesCS5B01G076500.1 Wheat cytosol 52.08 48.47
OQU93039 Sorghum cytosol 50.69 48.11
TraesCS4D01G077700.3 Wheat cytosol 52.77 48.11
TraesCS5A01G070700.1 Wheat cytosol 51.73 48.07
TraesCS4A01G048200.1 Wheat cytosol 50.35 48.02
Os12t0583500-01 Rice cytosol, plasma membrane 52.94 47.96
Os03t0609800-02 Rice cytosol 52.6 47.95
TraesCS4B01G078900.3 Wheat cytosol 52.6 47.95
TraesCS4B01G256600.1 Wheat cytosol 50.17 47.93
HORVU4Hr1G069760.10 Barley cytosol 50.69 47.88
Zm00001d033344_P001 Maize cytosol 52.6 47.87
TraesCS4A01G236100.1 Wheat cytosol 52.42 47.79
HORVU5Hr1G018480.1 Barley cytosol 52.08 47.78
TraesCS4D01G256700.1 Wheat cytosol 50.0 47.69
CDX81462 Canola cytosol 49.31 47.26
CDY37223 Canola cytosol 48.96 46.93
Zm00001d048138_P007 Maize cytosol 50.52 46.79
GSMUA_Achr10P... Banana cytosol 46.02 46.75
Zm00001d013741_P001 Maize cytosol 51.73 46.5
GSMUA_Achr7P26250_001 Banana cytosol 49.83 46.15
OQU79444 Sorghum cytosol 50.69 45.5
Zm00001d030864_P001 Maize cytosol 50.17 45.24
CDY50369 Canola cytosol 39.97 45.03
GSMUA_Achr2P13430_001 Banana cytosol 51.73 44.56
CDY72257 Canola cytosol 38.93 44.47
CDY72267 Canola cytosol 38.93 44.47
CDX75198 Canola cytosol 41.18 41.25
CDX68790 Canola cytosol 40.66 41.08
CDX83620 Canola cytosol 34.43 36.38
Zm00001d028075_P010 Maize endoplasmic reticulum 49.83 35.69
CDY13635 Canola cytosol 34.78 35.02
CDX77798 Canola cytosol 33.39 34.4
CDY17704 Canola cytosol 33.39 34.4
CDY10395 Canola cytosol 32.18 34.25
CDY68489 Canola cytosol, plastid 26.12 33.63
CDX70320 Canola cytosol 32.53 32.87
CDX80858 Canola cytosol 33.22 32.65
CDY11245 Canola cytosol 33.22 32.11
CDX90249 Canola cytosol, mitochondrion, nucleus 34.95 32.01
CDX85639 Canola cytosol 31.49 31.82
CDY09586 Canola cytosol 35.12 30.95
CDY27653 Canola cytosol 32.87 30.74
CDY02293 Canola cytosol, mitochondrion, nucleus 34.95 30.65
CDY45241 Canola cytosol 31.49 30.43
CDY09812 Canola cytosol 32.01 30.43
CDX69627 Canola cytosol 31.83 30.31
CDY57436 Canola cytosol 30.97 29.68
CDX81221 Canola cytosol 37.37 29.59
CDY12841 Canola cytosol 30.8 29.52
CDY18715 Canola cytosol 36.85 29.42
CDX84515 Canola cytosol 36.85 29.34
CDY30765 Canola cytosol 32.18 29.34
CDX99692 Canola cytosol, mitochondrion, nucleus 32.7 29.3
CDX89922 Canola cytosol 31.83 29.21
CDX73781 Canola cytosol 27.51 29.17
CDY18140 Canola cytosol 31.66 29.05
CDY37857 Canola cytosol 30.1 29.0
CDY30615 Canola cytosol 24.74 28.66
CDX77951 Canola cytosol 27.16 28.65
CDY57361 Canola cytosol 24.57 28.46
CDY37449 Canola cytosol 23.7 28.19
CDX84827 Canola cytosol 27.51 28.14
CDX85365 Canola cytosol 30.1 28.06
CDX86278 Canola cytosol 30.1 28.06
CDY23992 Canola cytosol 26.82 27.43
CDY32492 Canola cytosol 30.28 27.43
CDY02075 Canola cytosol 27.16 27.07
CDY10743 Canola cytosol 27.16 27.02
CDX73937 Canola plastid 27.16 26.88
CDY00659 Canola plastid 27.16 26.84
CDY52208 Canola plastid 29.93 26.78
CDX83030 Canola plastid 24.39 26.36
CDY09561 Canola cytosol 27.51 26.32
CDY02305 Canola cytosol 27.34 26.03
CDX69851 Canola cytosol 27.16 24.92
CDX96986 Canola cytosol 26.64 24.6
CDY29723 Canola cytosol 29.58 24.53
CDY72506 Canola cytosol 5.36 24.41
CDY20341 Canola cytosol 29.24 23.8
CDY12056 Canola plasma membrane 34.78 12.45
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1UniProt:A0A078GVN9InterPro:BTB/POZ_domEnsemblPlants:CDY29566ProteinID:CDY29566
ProteinID:CDY29566.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00043287001
InterPro:IPR000210InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097
PFscan:PS51649PANTHER:PTHR32370PANTHER:PTHR32370:SF26InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143
UniParc:UPI0004EE2352SEG:seg::::
Description
BnaA03g54110DBnaA03g54110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVN9]
Coordinates
chrLK032239:-:292508..295520
Molecular Weight (calculated)
64430.5 Da
IEP (calculated)
6.678
GRAVY (calculated)
-0.379
Length
578 amino acids
Sequence
(BLAST)
001: MKFMKLGSKP DSFQSEGDNV RYVSSDLATD VIVTIGDVKF YLHKFPLLSK SARLQKLIAA TSSNEDNEIH QEEDEIVIPE IPGGAASFEI CAKFCYGMTV
101: TLNAYNVVAA RCAAEFLEMH ETVEKGNLVY KIEVFLNSSI LQSWKDSIIT LQTTRALSPH AEELKLTGRC LESIASRACI DTSRVEWSYT YSKKKNLDNG
201: LRRPQAVPRD WWVEDLCDLH IDLYKRVIAT IESRGKVSAD VIGEALHAYA TKRVPGFSKS SSSVQITDYA KYRALVGSII EMIPEEKRSV SSSFLTKLLR
301: ASIFLGCDEE TGLINRVGER LDEASLSDVM LYDVDLMLNL VEVFLKSRSE EDDVTRKASV AKLVDGYLAE RSRDSDKLTL QKFLAIAEMV SGFPRQSHDG
401: VYRAIDMFLK EHPEINKSEK KRICRLMDCR KLSVEACAHA VQNERLPMRV VVQVLFFEQA RANNNNNNNG SSSTGNSTPE IIPASRSTNT EDETESWDTE
501: DIKTLRGELA SLRLAKNQQQ ENIKGKLVKG GGLGVSRVFS KLWSGKERSG EMMSSSGTSS PGSINDDSKS SSSTNKKH
Best Arabidopsis Sequence Match ( AT4G37590.1 )
(BLAST)
001: MKFMKLGSKP DSFQSEGDNV RYVSSELATD VIVIIGDVKF YLHKFPLLSK SARLQKLITT STSSSNEENQ IHHHHHEDEI EIAEIPGGPA SFEICAKFCY
101: GMTVTLNAYN VVAARCAAEF LEMYETVEKG NLVYKIEVFL NSSILQSWKD SIIVLQTTRA LSPYSEELKL TGRCLDSIAS RASIDTSKVE WSYTYSKKKN
201: LDNGLRKPQA VPRDWWVEDL CDLHIDLYKR ALATIEARGN VSADVIGEAL HAYAIKRIPG FSKSSSVQVT DFAKYRALAD SIIELIPDEK RSVSSSFLTK
301: LLRASIFLGC DEVAGLKNRV GERLDEANLG DVLLYDVELM QSLVEVFLKS RDPREDDVTA KASVAKLVDG YLAEKSRDSD NLPLQKFLSL AEMVSSFPRQ
401: SHDGVYRAID MFLKEHPEMN KSEKKRICRL MDCRKLSAEA CAHAVQNERL PMRVVVQVLF FEQVRANNNG SSSTGNSTPE VIPASRSTNT TDQEDTECWD
501: TEDIKALRGE LANLRLAKNQ QESHNQGKLM KGGGLGVSRV FSKLWSGKER SGDMISSSGT SSPGSVNDDS KSSSSTSKKH
Arabidopsis Description
NPY5BTB/POZ domain-containing protein NPY5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WL52]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.