CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90249	Canola	cytosol, mitochondrion, nucleus	37.79	96.67
CDY02293	Canola	cytosol, mitochondrion, nucleus	35.01	85.74
CDY09586	Canola	cytosol	34.82	85.67
CDY27653	Canola	cytosol	29.0	75.73
CDX99692	Canola	cytosol, mitochondrion, nucleus	29.49	73.8
Solyc02g021640.2.1	Tomato	nucleus	28.0	71.86
VIT_10s0003g04490.t01	Wine grape	cytosol	28.07	71.68
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	27.82	71.38
KRH12771	Soybean	cytosol	28.25	70.92
KRH37734	Soybean	cytosol	28.19	70.76
EER91175	Sorghum	cytosol	25.28	64.66
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	25.09	64.39
GSMUA_Achr5P02440_001	Banana	cytosol	22.49	63.35
GSMUA_Achr4P31620_001	Banana	cytosol	23.23	62.81
GSMUA_Achr5P00550_001	Banana	cytosol	24.41	62.64
HORVU5Hr1G093120.2	Barley	cytosol	24.6	62.62
TraesCS5D01G385100.1	Wheat	plastid	24.6	62.42
GSMUA_Achr6P30010_001	Banana	cytosol	20.94	61.68
GSMUA_Achr9P26110_001	Banana	cytosol	22.8	60.73
Os12t0613250-00	Rice	plasma membrane	24.29	60.31
TraesCS5A01G042600.1	Wheat	cytosol	23.54	60.03
TraesCS5D01G051100.1	Wheat	cytosol	23.48	59.97
TraesCS5A01G375500.3	Wheat	peroxisome	23.67	59.32
TraesCS5B01G377600.1	Wheat	cytosol	24.72	58.85
Os08t0130600-01	Rice	plasma membrane	23.17	58.35
HORVU7Hr1G073650.1	Barley	cytosol	22.86	57.57
TraesCS7D01G306400.1	Wheat	cytosol	22.86	57.39
TraesCS5B01G046200.2	Wheat	mitochondrion	22.74	57.17
TraesCS7A01G309700.1	Wheat	cytosol	22.74	57.08
TraesCS7B01G209700.1	Wheat	cytosol	22.68	56.92
EES14497	Sorghum	cytosol	22.55	55.32
Zm00001d035208_P002	Maize	cytosol	22.55	54.9
CDY10395	Canola	cytosol	17.84	53.04
CDX70320	Canola	cytosol	18.46	52.1
CDX80858	Canola	cytosol	18.4	50.51
CDY72506	Canola	cytosol	3.97	50.39
CDY11245	Canola	cytosol	18.4	49.67
HORVU5Hr1G010370.2	Barley	plastid	23.48	48.04
CDX85639	Canola	cytosol	16.85	47.55
CDX69627	Canola	cytosol	17.41	46.29
CDY09812	Canola	cytosol	17.41	46.22
CDY30765	Canola	cytosol	16.91	43.06
CDY45241	Canola	cytosol	15.92	42.98
CDX77951	Canola	cytosol	14.31	42.15
CDX73781	Canola	cytosol	14.13	41.83
CDY29723	Canola	cytosol	16.98	39.31
CDY20341	Canola	cytosol	17.04	38.73
CDY38923	Canola	cytosol	11.09	37.6
CDX89539	Canola	cytosol	11.09	37.37
CDY68489	Canola	cytosol, plastid	10.29	36.97
CDY72267	Canola	cytosol	11.52	36.76
CDY72257	Canola	cytosol	11.46	36.56
CDX81314	Canola	cytosol	11.65	35.74
CDY44035	Canola	cytosol	12.7	35.65
CDX85365	Canola	cytosol	13.57	35.32
CDY22422	Canola	cytosol	12.58	35.3
CDY37857	Canola	cytosol	13.07	35.17
CDX86278	Canola	cytosol	13.51	35.16
CDY18660	Canola	cytosol	11.46	35.04
CDY29566	Canola	cytosol	12.45	34.78
CDX72639	Canola	cytosol	12.45	34.78
CDY18715	Canola	cytosol	15.3	34.12
CDY69095	Canola	cytosol	11.83	34.05
CDY12841	Canola	cytosol	12.7	34.0
CDY57436	Canola	cytosol	12.7	34.0
CDX84515	Canola	cytosol	15.24	33.88
CDY00659	Canola	plastid	12.27	33.85
CDY12846	Canola	cytosol	11.83	33.81
CDX73937	Canola	plastid	12.21	33.73
CDX81221	Canola	cytosol	14.99	33.15
CDX68790	Canola	cytosol	11.71	33.04
CDX81462	Canola	cytosol	12.27	32.84
CDX89922	Canola	cytosol	12.76	32.7
CDY37223	Canola	cytosol	12.21	32.67
CDY18140	Canola	cytosol	12.7	32.54
CDY30615	Canola	cytosol	10.04	32.46
CDY57361	Canola	cytosol	9.98	32.26
CDX75198	Canola	cytosol	11.52	32.24
CDX83620	Canola	cytosol	10.9	32.18
CDY02075	Canola	cytosol	11.52	32.07
CDY10743	Canola	cytosol	11.52	32.01
CDY32492	Canola	cytosol	12.64	31.97
CDY50369	Canola	cytosol	10.16	31.97
CDX84827	Canola	cytosol	11.15	31.86
CDY09561	Canola	cytosol	11.9	31.79
CDY23992	Canola	cytosol	11.09	31.68
CDY13635	Canola	cytosol	11.21	31.53
CDY02305	Canola	cytosol	11.83	31.47
CDY52208	Canola	plastid	12.45	31.11
CDY37449	Canola	cytosol	8.98	29.84
CDX77798	Canola	cytosol	10.29	29.59
CDY17704	Canola	cytosol	10.29	29.59
CDX83030	Canola	plastid	9.67	29.16
CDX69851	Canola	cytosol	11.21	28.73
CDX96986	Canola	cytosol	10.9	28.11
Os12t0613300-02	Rice	nucleus	0.5	2.69

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.9	Gene3D:3.30.710.10	GO:A0A078FFP9	UniProt:A0A078FFP9	InterPro:AA-permease/SLC12A_dom
InterPro:BTB/POZ_dom	EnsemblPlants:CDY12056	ProteinID:CDY12056	ProteinID:CDY12056.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0015377	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:1902476	EnsemblPlantsGene:GSBRNA2T00061010001
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00324	PFAM:PF03000	PFAM:PF03522
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR11827	PANTHER:PTHR11827:SF68	InterPro:SKP1/BTB/POZ_sf	InterPro:SLC12A_fam
InterPro:SLC12_C	SMART:SM00225	SUPFAM:SSF54695	TIGRFAMs:TIGR00930	TMHMM:TMhelix	UniPathway:UPA00143
UniParc:UPI0004EEEC7D	SEG:seg	:	:	:	:

Description

BnaC03g59720DBnaC03g59720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFP9]

Coordinates

chrLK032017:+:149637..158802

Molecular Weight (calculated)

176983.0 Da

IEP (calculated)

6.511

GRAVY (calculated)

0.043

Length

1614 amino acids

Sequence
(BLAST)

0001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDV VVEVGEMSFH LHKFPLLSRS GVMERNIAEA SQEADDDKCL IQISDLPGGD KTFELIAKFC YGVKLELTAS
0101: NVVHLRCAAE HLEMTEEHAE GNLISQTETF LNQVVLKSWK DSLKSLQTCS EVSHYAEELN ITKKCIESLA VRASTTDPNL FGWPVVDPMQ SPGGSVLWNG
0201: ISTGARVKHT SSDWWYEDAS TLSFPLFKRL ITVMDSRGGV REDIIAGSLT YYTRKHLPGL KRRRGGPEAS GRFSSSGTVL SEEEQKHLLE EIQDLLPVQK
0301: ANLEKRIGMQ LDQAALEDLV MPSFTHTMET LYDVDSVQRI LDHFLGTDQI MTVGGGVGSP CSSVDDGNLM GSPQRITPMT AVSKLIDGYL AEVAPDVNLK
0401: LPKFQALAGS VPECARLLDD GLYRAIDIYL KHHPWLAETE RENLCRLLDC QKLSLEACTH AAQNDRLPLR VIVQVLFFEQ LQLRTSVAGC FLVSDNLDGG
0501: SRQLRSGGFA GGSAEGGGGG WASAVRENQV LKVGMDSMRM RVCELEKECS NMRQEIEKLG KTSKVGGGGK TWENVSKKLG FGIKLKSHQM CSAQEGSVSK
0601: SNSENVKIEK LKDVKERRGK HKKASSISSE RSNGSVQIRA GEMDRGDIEE SGGEEEFPRL GGGKYRPVGA HDRAVVEMSS IDPGSSSSTL KNIRVVAPGE
0701: MGAGAREGPI PEDGVNGHQK ESKLELFGFD SLVNILGLKS MTGEQIPAPS SPRDGEDISI MQGHPKPALK MGTMMGVFVP CLQNILGIIY YIRFTWIVGM
0801: AGIGQSLVLV LLCGLCTFLT TISLSAIATN GAMKGGGPYY LIGRALGPEV GISIGLCFFL GNAVAGALYV LGAVETFLKA FPAAGIFRET ITKVNGTAVA
0901: ESVQSPSSHD LQIYGIVVTI LLCFIVFGGV KMINRVAPAF LLPVLLSILC IFIGMFLAKT DDPDTGITGL RLKSFRDNWS SAYQMTNNAG IPDPLGGTYW
1001: SFNELVGLFF PAVTGIMAGS NRSASLKDTQ RSIPVGTLAA TLSTTLLYVI SVLFFGAVAT RDKLLTDRLL TATVAWPLPL IVHVGIILST LGAALQSLTG
1101: APRLLAAIAN DDILPILNYF KVADTSEPHI ATLFTALICI GCVVIGNLDL ITPTVTMFYL LCYAGVNLSC FLLDLLDAPS WRPRWKYHHW SLSFVGASLC
1201: IVIMFLISWS FTVVAIALAS LIYKYVGLKG KAGDWGDGFK SAYFQLALRS LRSLGADQVH PKNWYPIPLV FCRPWGQLPE NVPCHPKLAD FANCMKKKGR
1301: GMSIFVSILD GDYYECAEEA KEACKQLATY IEYKRCEGVA EIVVAPNMTE GFRGIIQTMG LGNLKPNIVV MRYPEIWRRE NLTEIPSTFV GIINDCITAN
1401: KGVVIIKGLE EWPNEYQRQY GTIDLYWIVR DGGLMLLLSQ LLLTKESFES CKIQLFCIAE EDSDAEALKA DVKKFLYDLR MQAEVIVVTM KSWDIRSEGN
1501: SKEDSLEAFD AAQRRISDYL GEIKSQGSTP RLANGKMMVV NEQQVEKFLY TMLKLNSTIL SYSRMAAVVL VSLPPPPLNH PAYFYMEYMD LLVENVPRML
1601: IVRGYHRDVV TLFT

Best Arabidopsis Sequence Match ( AT1G30450.1 )
(BLAST)

001: MDSGDIEEAG GNGEEEFRSG PRLGGSKYRP VVAHDRAVVE MSSIDPGSSS STLKNIKVVA PGDVGAGVRG PEDGVNGHQK ESKLELFGFD SLVNILGLKS
101: MTGEQIQAPS SPRDGEDISI TQGHPKPPAL KMGTMMGVFV PCLQNILGII YYIRFTWIVG MAGIGQGLVL VFLCGLCTFL TTISLSAIAT NGAMKGGGPY
201: YLIGRALGPE VGISIGLCFF LGNAVAGALY VLGAVETFLK AFPAAGIFRE TITKVNGTAV SESIQSPNSH DLQVYGIVVT ILLCFIVFGG VKMINRVAPA
301: FLVPVLLSIF CIFIGIFLAK TDDPDNGITG LRLKSFKDNW GSAYQMTNDA GIPDPTGGTY WSFNELVGLF FPAVTGIMAG SNRSASLKDT QKSIPVGTLA
401: ATLTTTSLYL ISVLFFGAVA TRDKLLTDRL LTATIAWPFP AIVHVGIILS TLGAALQSLT GAPRLLAAIA NDDILPILNY FKVADTSEPH IATLFTAFIC
501: IGCVVIGNLD LITPTVTMFY LLCYSGVNLS CFLLDLLDAP SWRPRWKYHH WSLSFVGASL CIVIMFLISW SFTVVAIALA SLIYKYVGLK GKAGDWGDGF
601: KSAYFQLALR SLRSLGANQV HPKNWYPIPL VFCRPWGQLP ENVPCHPKLA DFANCMKKKG RGMSIFVSIL DGDYYECAEE AKEACKQLAT YIEYKRCEGV
701: AEIVVAPNMT EGFRGIIQTM GLGNLKPNIV VMRYPEIWRR ENLTEIPSTF VGIINDCITA NKAVVIIKGL DEWPNEYQRQ YGTIDLYWIV RDGGLMLLLS
801: QLLLTKESFE SCKIQLFCIA EEDSDAEALK ADVKKFLYDL RMHAEVIVVT MKSWDIRSEG NSQEDSLEAF DAAQRRISDY LGEIKRQGSN PLLANGKPMV
901: VNEQQVEKFL YTMLKLNSTI LSYSRMAAVV LVSLPPPPLN HPAYFYMEYM DLLVENVPRM LIVRGYHRDV VTLFT

Arabidopsis Description

CCC1Cation-chloride cotransporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2UVJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.