Factsheet for Os08t0130600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G306400.1	Wheat	cytosol	87.52	87.25
TraesCS7B01G209700.1	Wheat	cytosol	87.36	87.09
TraesCS7A01G309700.1	Wheat	cytosol	87.05	86.78
HORVU7Hr1G073650.1	Barley	cytosol	86.27	86.27
EES14497	Sorghum	cytosol	84.87	82.67
Zm00001d035208_P002	Maize	cytosol	83.31	80.54
VIT_10s0003g04490.t01	Wine grape	cytosol	67.08	68.04
Solyc02g021640.2.1	Tomato	nucleus	64.74	65.98
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	64.43	65.66
KRH37734	Soybean	cytosol	64.9	64.7
KRH12771	Soybean	cytosol	64.9	64.7
Os12t0613250-00	Rice	plasma membrane	60.69	59.85
CDY09586	Canola	cytosol	61.0	59.6
CDX90249	Canola	cytosol, mitochondrion, nucleus	58.5	59.43
CDY02293	Canola	cytosol, mitochondrion, nucleus	61.0	59.33
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	61.15	59.3
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	61.47	59.25
CDY27653	Canola	cytosol	54.6	56.63
CDX99692	Canola	cytosol, mitochondrion, nucleus	55.69	55.35
Bra025440.1-P	Field mustard	cytosol	48.52	54.28
Os01t0780600-01	Rice	plasma membrane	49.92	48.56
Os04t0636500-01	Rice	plasma membrane	48.21	47.98
Os03t0767600-01	Rice	cytosol	40.41	37.92
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	38.53	37.65
Os03t0609800-02	Rice	cytosol	35.1	35.49
Os12t0583500-01	Rice	cytosol, plasma membrane	34.95	35.11
Os03t0205700-01	Rice	cytosol	32.61	34.55
Os11t0118500-00	Rice	plastid	33.23	33.13
Os12t0117600-01	Rice	plastid	33.39	32.87
Os03t0206700-00	Rice	plasma membrane	31.67	32.43
Os03t0347700-01	Rice	mitochondrion, plastid	33.54	32.04
Os06t0184500-00	Rice	cytosol	31.98	31.83
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	31.05	31.74
Os09t0420900-01	Rice	cytosol	30.27	31.39
Os02t0568200-00	Rice	cytosol	37.13	31.23
Os12t0117400-01	Rice	plasma membrane	25.43	28.6
Os09t0266600-01	Rice	cytosol	17.94	27.64
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	25.27	26.26
CDY12056	Canola	plasma membrane	58.35	23.17
Os02t0594700-01	Rice	cytosol, mitochondrion	6.24	21.05
Os12t0613300-02	Rice	nucleus	0.94	2.02

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4344591	ProteinID:BAD09643.1	ProteinID:BAD33364.1	ProteinID:BAF22838.1
ProteinID:BAT03698.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	EnsemblPlantsGene:Os08g0130600	EnsemblPlants:Os08t0130600-01	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF23	UniProt:Q7EZR6
InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000023AEBA	RefSeq:XP_015650254.1	SEG:seg	:

Description

BTB domain containing protein. (Os08t0130600-01)

Coordinates

chr8:-:1723655..1729958

Molecular Weight (calculated)

71302.0 Da

IEP (calculated)

6.384

GRAVY (calculated)

-0.226

Length

641 amino acids

Sequence
(BLAST)

001: MACLKLGSRA DVFRKQGQDW YCTTGLPSDI TVTVGEQSFH LHKFPLLSKS GLLERCIREK IENGDNSCVI DLSDIPGGAK AFELTAKFCY GVKFEMTASN
101: VVHLRCAAEY LEMTEEIAEG NLIAQTENFL TQTVLRSWKD SIKALHTCDD IIDLAEKLQI VKRCIDSVAT RSCTDPDLFG WPVVQYGGPM QSPGGSVLWN
201: GISTGARPRH SSPDWWYDDV SCLSLPLYKK VISAMEYRGI NQDIIVGSLN HYAKRRLPGL NRRKSISDVS SCLSISSLTS IPSEEEQKYL LEEIDRLLPF
301: QRGVTSCKLL FGLLRTAIIL KASPSCVSNL ERRIGMQLDK ATLEDLLIPN ISESVETLYD VDCVHKILDH FLAMDQETGG ASPGLGEDAQ MLASPSLMPI
401: TMVAKLIDGY LAEVAPDVNL KLPKFRSLAA AIPDYARPID DGLYRAIDIY LKAHPHLSES EKEELCRVMD CQKLSLEACT HAAQNERLPL RVIVQVLFFE
501: QLQLRSSIAE CLMVSENLEG GSRQLIPTIS GEQYRPGWPL ASRENQALRE GMDNMKQRVA DLEKECSTMR DEIERLGRSR STGKGRFSLN MKPQICSTKE
601: AIPTTATTTA TASEEKMAVV KGDTTPRLKL SRHKKKLSIE A

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.