Factsheet for Bra032391.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02293	Canola	cytosol, mitochondrion, nucleus	99.24	99.54
CDY09586	Canola	cytosol	98.34	99.09
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	93.65	93.08
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	87.9	88.57
Bra025440.1-P	Field mustard	cytosol	69.89	80.63
Solyc02g021640.2.1	Tomato	nucleus	71.56	75.2
VIT_10s0003g04490.t01	Wine grape	cytosol	71.71	75.0
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	71.26	74.88
KRH37734	Soybean	cytosol	72.47	74.49
KRH12771	Soybean	cytosol	71.86	73.87
EER91175	Sorghum	cytosol	64.3	67.35
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	63.99	67.25
GSMUA_Achr5P02440_001	Banana	cytosol	57.49	66.32
GSMUA_Achr5P00550_001	Banana	cytosol	62.18	65.34
HORVU5Hr1G093120.2	Barley	cytosol	62.33	64.98
TraesCS5D01G385100.1	Wheat	plastid	62.33	64.78
GSMUA_Achr4P31620_001	Banana	cytosol	58.25	64.49
GSMUA_Achr6P30010_001	Banana	cytosol	53.4	64.42
GSMUA_Achr9P26110_001	Banana	cytosol	57.34	62.54
Os12t0613250-00	Rice	plasma membrane	61.27	62.31
TraesCS5A01G042600.1	Wheat	cytosol	59.46	62.09
TraesCS5D01G051100.1	Wheat	cytosol	59.15	61.87
TraesCS5A01G375500.3	Wheat	peroxisome	60.21	61.8
Os08t0130600-01	Rice	plasma membrane	59.3	61.15
TraesCS5B01G377600.1	Wheat	cytosol	62.63	61.06
TraesCS5B01G046200.2	Wheat	mitochondrion	57.49	59.19
HORVU7Hr1G073650.1	Barley	cytosol	57.34	59.13
TraesCS7D01G306400.1	Wheat	cytosol	57.49	59.1
TraesCS7A01G309700.1	Wheat	cytosol	57.19	58.79
EES14497	Sorghum	cytosol	58.4	58.66
TraesCS7B01G209700.1	Wheat	cytosol	57.03	58.63
Zm00001d035208_P002	Maize	cytosol	58.25	58.07
Bra005737.1-P	Field mustard	cytosol	45.54	51.19
HORVU5Hr1G010370.2	Barley	plastid	59.3	49.68
Bra008815.1-P	Field mustard	cytosol	43.72	47.61
Bra037606.1-P	Field mustard	cytosol	42.06	43.37
Bra012082.1-P	Field mustard	cytosol	43.87	43.35
Bra023423.1-P	Field mustard	cytosol	36.16	43.3
Bra036858.1-P	Field mustard	cytosol	37.07	42.68
Bra032187.1-P	Field mustard	cytosol	27.69	38.2
Bra037460.1-P	Field mustard	cytosol	34.64	36.94
Bra001349.1-P	Field mustard	plastid	31.47	35.68
Bra010603.1-P	Field mustard	cytosol	31.01	35.65
Bra037846.1-P	Field mustard	cytosol	28.14	35.36
Bra024285.1-P	Field mustard	cytosol	38.73	35.31
Bra012166.1-P	Field mustard	cytosol	29.8	34.99
Bra017837.1-P	Field mustard	cytosol	30.41	34.78
Bra037773.1-P	Field mustard	cytosol	38.43	34.46
Bra012158.1-P	Field mustard	cytosol	30.71	33.78
Bra033365.1-P	Field mustard	cytosol	31.62	33.17
Bra032401.1-P	Field mustard	cytosol	29.95	32.62
Bra018309.1-P	Field mustard	cytosol, plastid	28.9	32.32
Bra032564.1-P	Field mustard	cytosol, plastid	31.01	32.13
Bra025208.1-P	Field mustard	cytosol	27.69	31.88
Bra022805.1-P	Field mustard	cytosol	27.69	31.83
Bra004064.1-P	Field mustard	cytosol	30.26	31.8
Bra029894.1-P	Field mustard	plastid	30.86	31.58
Bra024915.1-P	Field mustard	cytosol	26.78	31.55
Bra031830.1-P	Field mustard	cytosol	26.32	31.52
Bra011301.1-P	Field mustard	cytosol	27.38	31.37
Bra039820.1-P	Field mustard	cytosol	29.65	31.26
Bra036043.1-P	Field mustard	cytosol	25.87	31.2
Bra009047.1-P	Field mustard	cytosol	27.84	29.21
Os12t0613300-02	Rice	nucleus	1.21	2.69
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra032391.1	EnsemblPlants:Bra032391.1-P	EnsemblPlantsGene:Bra032391	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	UniParc:UPI000254255B	UniProt:M4EUA9	MapMan:35.1	:

Description

AT1G30440 (E=0.0) | phototropic-responsive NPH3 family protein

Coordinates

chrA09:-:21802953..21805649

Molecular Weight (calculated)

72793.4 Da

IEP (calculated)

6.691

GRAVY (calculated)

-0.315

Length

661 amino acids

Sequence
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEEDDNCLI KISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEYGEG NLISQTETFF NQVVLKSWKD SVKALQSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGGP MQSPGGSVLW
201: NGISTGARPR QTSSDWWYED ASMLSFPLFK RLITVMDSRG IREDIIAGSL THYTRKHLPG LKRRRCGPPE SSGRFSTPLS SGSVLSEEEQ KRLLEETEEL
301: LRMQKGLVPT KFFADMLRIA KILKASPSCV ANLEKRIGMQ LDQAALEDLV MPSFSHTMET LYDVDSVQRI LDHFLSTDQI MPADVGSPCS SVDDGNVIGS
401: PRLITPMTAV AKLIDGYLAE VAPDVNLKLP KFQALAASVP EYARLLDDGL YRAIDIYLKH HPWLAETERE NLCRLLDCQK LSLEACTHAA QNERLPLRVI
501: VQVLFFEQLQ LRTSVAGCFL VSDNLDGGSR QLRSGGFAGG STEGGGGGGG GWATAVRENQ VLKVGMDSMR MRVCELEKEC SNMRQEIEKL GKTTKGGGGG
601: GGSGSGSKTW FGIKLKSHQM CSAQEGSVSK SNNENVKMEK LKDVKERRGK HKKASSISSE R

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.