Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86278 Canola cytosol 99.68 99.68
AT5G48800.1 Thale cress cytosol 93.23 94.14
VIT_07s0005g06300.t01 Wine grape cytosol 77.9 78.41
PGSC0003DMT400003100 Potato cytosol 73.71 76.29
KRH66064 Soybean extracellular 75.16 76.02
Solyc09g061250.2.1 Tomato cytosol 73.87 75.45
PGSC0003DMT400045508 Potato cytosol 73.06 74.63
KRG99570 Soybean cytosol, endoplasmic reticulum, nucleus 76.45 70.33
GSMUA_Achr6P27970_001 Banana cytosol 55.48 66.54
Bra001349.1-P Field mustard plastid 42.1 44.77
Bra032401.1-P Field mustard cytosol 42.74 43.66
Bra033365.1-P Field mustard cytosol 42.74 42.06
Bra012158.1-P Field mustard cytosol 40.48 41.76
Bra032564.1-P Field mustard cytosol, plastid 42.9 41.69
Bra029894.1-P Field mustard plastid 41.94 40.25
Bra031830.1-P Field mustard cytosol 35.48 39.86
Bra036043.1-P Field mustard cytosol 33.87 38.32
Bra018309.1-P Field mustard cytosol, plastid 36.13 37.9
Bra022805.1-P Field mustard cytosol 35.0 37.74
Bra010771.1-P Field mustard cytosol, mitochondrion, nucleus 36.77 34.76
Bra032391.1-P Field mustard cytosol, mitochondrion, nucleus 36.94 34.64
Bra032187.1-P Field mustard cytosol 26.45 34.24
Bra005737.1-P Field mustard cytosol 32.1 33.84
Bra008815.1-P Field mustard cytosol 32.42 33.11
Bra025440.1-P Field mustard cytosol 30.16 32.64
Bra036858.1-P Field mustard cytosol 29.84 32.23
Bra012166.1-P Field mustard cytosol 29.19 32.15
Bra037846.1-P Field mustard cytosol 26.61 31.37
Bra010603.1-P Field mustard cytosol 29.03 31.3
Bra012082.1-P Field mustard cytosol 33.55 31.09
Bra037606.1-P Field mustard cytosol 32.1 31.05
Bra023423.1-P Field mustard cytosol 27.42 30.8
Bra039820.1-P Field mustard cytosol 30.97 30.62
Bra017837.1-P Field mustard cytosol 28.06 30.1
Bra004064.1-P Field mustard cytosol 30.48 30.05
Bra024285.1-P Field mustard cytosol 35.0 29.93
Bra025208.1-P Field mustard cytosol 27.58 29.79
Bra011301.1-P Field mustard cytosol 27.42 29.46
Bra037773.1-P Field mustard cytosol 34.03 28.63
Bra009047.1-P Field mustard cytosol 29.03 28.57
Bra024915.1-P Field mustard cytosol 25.81 28.52
Bra010770.1-P Field mustard plasma membrane 0.0 0.0
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1InterPro:BTB/POZ_domEnsemblPlantsGene:Bra037460EnsemblPlants:Bra037460.1EnsemblPlants:Bra037460.1-P
ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0016020InterPro:IPR000210InterPro:IPR027356UniProt:M4F8P8InterPro:NPH3_dom
PFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649PANTHER:PTHR32370PANTHER:PTHR32370:SF21
InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniParc:UPI000253F986SEG:seg::
Description
AT5G48800 (E=3e-269) | phototropic-responsive NPH3 family protein
Coordinates
chrA06:-:21327361..21329439
Molecular Weight (calculated)
69790.3 Da
IEP (calculated)
6.890
GRAVY (calculated)
-0.389
Length
620 amino acids
Sequence
(BLAST)
001: MDKHHPHLLL QHHQHLHHHQ KLSLAKSSRQ SCSEWIFRDV PSDITIEVNG GNFALHKFPL VSRSGRIRRI VAEHRDSDIS KVELLNLPGG AETFELAAKF
101: CYGINFEITS SNVAQLLCVS DYLEMTEEYS KDNLASRTEE YLDSIVCKSL EMCVQVLKQS ENLLPLADEL SIVTRCIDAI ASKACAEQIA SSFSRLEYSS
201: SGRLHMSKQA KGNDGGGGDW WIEDLSVLRI DLYQRVMNAM KCRGVRPESI GASLVSYAER ELTKTGHQEH EQAIVETIVA LLPVEKLVVP ISFLFGLLRR
301: AVMLDASVSC RLDLERRIGS QLDMATLDDL LIPSFRHSGD TLFEIDTVHR ILVNFSQQGG DDSEDEESVF ECGDDSSPHT PSQSAMFKVA KLVDSYLAEI
401: APDANLDLPK FLLIAEALPL HARTLHDGLY RAIDLYLKAH QGLSDSDKKK LSKLIDFQKL SQEAGAHAAQ NERLPLQSIV QVLYFEQLKL RSSLCTSYSD
501: EETKPKQQQQ QSWRINSGAL SAAMSPKDNY ASLRRENREL KLELARLRMR LNDLEKEHIC MKRDMQRSHS RKFMSSFSKK MGKLSFFGGH HGSSRGSSSP
601: SKQSFRTDSK AMERTCASMD
Best Arabidopsis Sequence Match ( AT5G48800.1 )
(BLAST)
001: MDKHHHQHLL LQHHQHLHHH QKLSLAKSSR QSCSEWIFRD VPSDITIEVN GGNFALHKFP LVSRSGRIRR IVAEHRDSDI SKVELLNLPG GAETFELAAK
101: FCYGINFEIT SSNVAQLFCV SDYLEMTEEY SKDNLASRTE EYLESIVCKN LEMCVQVLKQ SEILLPLADE LNIIGRCIDA IASKACAEQI ASSFSRLEYS
201: SSGRLHMSRQ VKSSGDGGDW WIEDLSVLRI DLYQRVMNAM KCRGVRPESI GASLVSYAER ELTKRSEHEQ TIVETIVTLL PVENLVVPIS FLFGLLRRAV
301: ILDTSVSCRL DLERRLGSQL DMATLDDLLI PSFRHAGDTL FDIDTVHRIL VNFSQQGGDD SEDEESVFEC DSPHSPSQTA MFKVAKLVDS YLAEIAPDAN
401: LDLSKFLLIA EALPPHARTL HDGLYRAIDL YLKAHQGLSD SDKKKLSKLI DFQKLSQEAG AHAAQNERLP LQSIVQVLYF EQLKLRSSLC SSYSDEEPKP
501: KQQQQQSWRI NSGALSATMS PKDNYASLRR ENRELKLELA RLRMRLNDLE KEHICMKRDM QRSHSRKFMS SFSKKMGKLS FFGHSSSRGS SSPSKQSFRT
601: DSKVLMERTC ASTD
Arabidopsis Description
BTB/POZ domain-containing protein At5g48800 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKB6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.