Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
- plasma membrane 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH66064 | Soybean | extracellular | 83.6 | 84.01 |
PGSC0003DMT400045508 | Potato | cytosol | 82.47 | 83.69 |
Solyc09g061250.2.1 | Tomato | cytosol | 82.31 | 83.53 |
PGSC0003DMT400003100 | Potato | cytosol | 78.57 | 80.8 |
AT5G48800.1 | Thale cress | cytosol | 78.9 | 79.15 |
KRG99570 | Soybean | cytosol, endoplasmic reticulum, nucleus | 86.04 | 78.64 |
CDX85365 | Canola | cytosol | 78.73 | 78.23 |
CDX86278 | Canola | cytosol | 78.57 | 78.06 |
Bra037460.1-P | Field mustard | cytosol | 78.41 | 77.9 |
GSMUA_Achr6P27970_001 | Banana | cytosol | 56.33 | 67.12 |
VIT_08s0056g00610.t01 | Wine grape | cytosol | 51.46 | 52.66 |
VIT_07s0104g01440.t01 | Wine grape | plastid | 47.24 | 46.12 |
VIT_07s0129g00380.t01 | Wine grape | cytosol | 44.16 | 42.77 |
VIT_06s0004g08230.t01 | Wine grape | mitochondrion | 36.36 | 39.16 |
VIT_00s1395g00010.t01 | Wine grape | cytosol | 29.06 | 38.33 |
VIT_10s0003g04490.t01 | Wine grape | cytosol | 37.82 | 36.87 |
VIT_13s0019g04420.t01 | Wine grape | cytosol | 36.04 | 35.86 |
VIT_00s0665g00050.t01 | Wine grape | cytosol | 28.9 | 35.53 |
VIT_00s0207g00230.t01 | Wine grape | cytosol | 36.04 | 34.96 |
VIT_08s0040g01800.t01 | Wine grape | cytosol | 33.93 | 33.49 |
VIT_07s0129g00250.t01 | Wine grape | cytosol | 33.6 | 32.91 |
VIT_03s0091g00680.t01 | Wine grape | cytosol | 32.95 | 32.53 |
VIT_01s0137g00820.t01 | Wine grape | cytosol, golgi, nucleus | 32.79 | 32.06 |
VIT_03s0038g00270.t01 | Wine grape | cytosol | 34.74 | 31.75 |
VIT_06s0061g01140.t01 | Wine grape | cytosol | 29.71 | 31.55 |
VIT_04s0008g06630.t01 | Wine grape | cytosol | 31.66 | 31.45 |
VIT_00s0194g00080.t01 | Wine grape | cytosol | 27.6 | 28.67 |
Protein Annotations
EntrezGene:100243107 | wikigene:100243107 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BTB/POZ_dom | ProteinID:CCB60275 |
ProteinID:CCB60275.1 | ncoils:Coil | UniProt:F6I009 | EMBL:FN596502 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR027356 | EntrezGene:LOC100243107 | wikigene:LOC100243107 | InterPro:NPH3_dom |
PFAM:PF00651 | PFAM:PF03000 | PFscan:PS50097 | PFscan:PS51649 | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF21 |
InterPro:SKP1/BTB/POZ_sf | SUPFAM:SSF54695 | UniParc:UPI0001985BFC | ArrayExpress:VIT_07s0005g06300 | EnsemblPlantsGene:VIT_07s0005g06300 | EnsemblPlants:VIT_07s0005g06300.t01 |
unigene:Vvi.24531 | RefSeq:XP_002265786 | RefSeq:XP_002265786.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:-:11382451..11388522
Molecular Weight (calculated)
69526.0 Da
IEP (calculated)
6.967
GRAVY (calculated)
-0.353
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKNNHLHHH QHHQQQQLSL AKCSRQRCNE WIFRDVPSDI TIEVSGGMFA LHKFPLVSRS GRIRKLVAER RDSENSRIEL LSLPGGAESF ELAAKFCYGV
101: NFEITSANVA QLCCVSDYLE MTEEFSKDNL GSRAEEYLES VVCKNLEMCV EVLQQCENLL PLADELKIVG RCIDAIASKA CVEQIASSFS RLEYSSSGRL
201: HMNRQAKCDG DWWIEDLSAL RIDLYQKVIT AMKCRGVRPE SIGASLVNYA QKELTKKSSL WNPSGQQKVE LVAGSSVHER LVVETIVSLL PVEKLAVPIN
301: FLFGILRSAV MLDCSVASRL DLERRIGSQL DIATLDDLLI PSFRHAGDTL FDVDTVHRIL VNFSQQDDSE EDMDDASVFE SESPPSPSQT ALFKVSKLVD
401: NYLAEIAPDA NLKLSKFMVI AETLPAHART VHDGLYRAID IYLKAHQGLT DPDKKKLSKL IDFQKLSQEA GAHAAQNERL PLQSIVQVLY FEQLRLRNAL
501: CTSYADEDQK PVHQSWRISS GALSAAMSPR DNYASLRREN RELKLELARL RMRLNDLEKE HVHMKRDMEK SHSLNFMSSF SRKIGKLNFF GHSSSRGSSS
601: PSKHSQRTDS KVIERT
101: NFEITSANVA QLCCVSDYLE MTEEFSKDNL GSRAEEYLES VVCKNLEMCV EVLQQCENLL PLADELKIVG RCIDAIASKA CVEQIASSFS RLEYSSSGRL
201: HMNRQAKCDG DWWIEDLSAL RIDLYQKVIT AMKCRGVRPE SIGASLVNYA QKELTKKSSL WNPSGQQKVE LVAGSSVHER LVVETIVSLL PVEKLAVPIN
301: FLFGILRSAV MLDCSVASRL DLERRIGSQL DIATLDDLLI PSFRHAGDTL FDVDTVHRIL VNFSQQDDSE EDMDDASVFE SESPPSPSQT ALFKVSKLVD
401: NYLAEIAPDA NLKLSKFMVI AETLPAHART VHDGLYRAID IYLKAHQGLT DPDKKKLSKL IDFQKLSQEA GAHAAQNERL PLQSIVQVLY FEQLRLRNAL
501: CTSYADEDQK PVHQSWRISS GALSAAMSPR DNYASLRREN RELKLELARL RMRLNDLEKE HVHMKRDMEK SHSLNFMSSF SRKIGKLNFF GHSSSRGSSS
601: PSKHSQRTDS KVIERT
001: MDKHHHQHLL LQHHQHLHHH QKLSLAKSSR QSCSEWIFRD VPSDITIEVN GGNFALHKFP LVSRSGRIRR IVAEHRDSDI SKVELLNLPG GAETFELAAK
101: FCYGINFEIT SSNVAQLFCV SDYLEMTEEY SKDNLASRTE EYLESIVCKN LEMCVQVLKQ SEILLPLADE LNIIGRCIDA IASKACAEQI ASSFSRLEYS
201: SSGRLHMSRQ VKSSGDGGDW WIEDLSVLRI DLYQRVMNAM KCRGVRPESI GASLVSYAER ELTKRSEHEQ TIVETIVTLL PVENLVVPIS FLFGLLRRAV
301: ILDTSVSCRL DLERRLGSQL DMATLDDLLI PSFRHAGDTL FDIDTVHRIL VNFSQQGGDD SEDEESVFEC DSPHSPSQTA MFKVAKLVDS YLAEIAPDAN
401: LDLSKFLLIA EALPPHARTL HDGLYRAIDL YLKAHQGLSD SDKKKLSKLI DFQKLSQEAG AHAAQNERLP LQSIVQVLYF EQLKLRSSLC SSYSDEEPKP
501: KQQQQQSWRI NSGALSATMS PKDNYASLRR ENRELKLELA RLRMRLNDLE KEHICMKRDM QRSHSRKFMS SFSKKMGKLS FFGHSSSRGS SSPSKQSFRT
601: DSKVLMERTC ASTD
101: FCYGINFEIT SSNVAQLFCV SDYLEMTEEY SKDNLASRTE EYLESIVCKN LEMCVQVLKQ SEILLPLADE LNIIGRCIDA IASKACAEQI ASSFSRLEYS
201: SSGRLHMSRQ VKSSGDGGDW WIEDLSVLRI DLYQRVMNAM KCRGVRPESI GASLVSYAER ELTKRSEHEQ TIVETIVTLL PVENLVVPIS FLFGLLRRAV
301: ILDTSVSCRL DLERRLGSQL DMATLDDLLI PSFRHAGDTL FDIDTVHRIL VNFSQQGGDD SEDEESVFEC DSPHSPSQTA MFKVAKLVDS YLAEIAPDAN
401: LDLSKFLLIA EALPPHARTL HDGLYRAIDL YLKAHQGLSD SDKKKLSKLI DFQKLSQEAG AHAAQNERLP LQSIVQVLYF EQLKLRSSLC SSYSDEEPKP
501: KQQQQQSWRI NSGALSATMS PKDNYASLRR ENRELKLELA RLRMRLNDLE KEHICMKRDM QRSHSRKFMS SFSKKMGKLS FFGHSSSRGS SSPSKQSFRT
601: DSKVLMERTC ASTD
Arabidopsis Description
BTB/POZ domain-containing protein At5g48800 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.