Factsheet for VIT_03s0091g00680.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35678	Soybean	cytosol	72.76	72.76
PGSC0003DMT400066161	Potato	cytosol	72.28	72.04
Solyc01g107180.2.1	Tomato	cytosol	72.12	71.89
VIT_07s0129g00250.t01	Wine grape	cytosol	72.44	71.86
PGSC0003DMT400013928	Potato	cytosol	67.47	69.02
Solyc10g049660.1.1	Tomato	cytosol	67.15	68.58
KRG91101	Soybean	mitochondrion	69.23	68.57
CDX81462	Canola	cytosol	63.46	65.67
CDY37223	Canola	cytosol	63.14	65.34
CDY50369	Canola	cytosol	53.21	64.72
Bra039820.1-P	Field mustard	cytosol	64.9	64.59
AT2G14820.2	Thale cress	cytosol	64.1	63.09
GSMUA_Achr4P10900_001	Banana	cytosol	55.45	62.12
EER91236	Sorghum	cytosol	61.06	60.19
Os03t0609800-02	Rice	cytosol	60.42	59.46
Zm00001d033344_P001	Maize	cytosol	60.42	59.37
GSMUA_Achr10P...	Banana	cytosol	54.01	59.23
TraesCS4B01G078900.3	Wheat	cytosol	59.94	58.99
TraesCS4A01G236100.1	Wheat	cytosol	59.94	58.99
TraesCS4D01G077700.3	Wheat	cytosol	59.78	58.83
GSMUA_Achr5P01710_001	Banana	cytosol	54.65	58.69
Zm00001d013741_P001	Maize	cytosol	60.26	58.48
OQU93039	Sorghum	cytosol	56.89	58.29
HORVU4Hr1G069760.10	Barley	cytosol	56.57	57.68
TraesCS4B01G256600.1	Wheat	cytosol	55.77	57.52
TraesCS4D01G256700.1	Wheat	cytosol	55.77	57.43
TraesCS4A01G048200.1	Wheat	cytosol	55.61	57.26
Os12t0583500-01	Rice	cytosol, plasma membrane	58.49	57.21
Os03t0205700-01	Rice	cytosol	55.29	57.02
GSMUA_Achr7P26250_001	Banana	cytosol	56.57	56.57
TraesCS5B01G076500.1	Wheat	cytosol	56.09	56.36
Zm00001d048138_P007	Maize	cytosol	55.77	55.77
TraesCS5D01G082800.1	Wheat	cytosol	55.29	55.47
TraesCS5A01G070700.1	Wheat	cytosol	55.29	55.47
HORVU5Hr1G018480.1	Barley	cytosol	55.13	54.6
GSMUA_Achr2P13430_001	Banana	cytosol	57.85	53.8
OQU79444	Sorghum	cytosol	55.29	53.57
Zm00001d030864_P001	Maize	cytosol	54.49	53.04
VIT_04s0008g06630.t01	Wine grape	cytosol	52.08	52.42
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	46.63	46.19
Zm00001d028075_P010	Maize	endoplasmic reticulum	55.93	43.25
VIT_00s1395g00010.t01	Wine grape	cytosol	29.17	38.97
VIT_00s0194g00080.t01	Wine grape	cytosol	35.1	36.93
VIT_00s0665g00050.t01	Wine grape	cytosol	29.65	36.93
VIT_10s0003g04490.t01	Wine grape	cytosol	35.9	35.44
VIT_03s0038g00270.t01	Wine grape	cytosol	37.5	34.72
VIT_13s0019g04420.t01	Wine grape	cytosol	32.85	33.12
VIT_08s0040g01800.t01	Wine grape	cytosol	33.01	33.01
VIT_07s0005g06300.t01	Wine grape	cytosol	32.53	32.95
VIT_08s0056g00610.t01	Wine grape	cytosol	31.09	32.23
VIT_00s0207g00230.t01	Wine grape	cytosol	31.73	31.18
VIT_07s0129g00380.t01	Wine grape	cytosol	31.57	30.97
VIT_06s0061g01140.t01	Wine grape	cytosol	27.88	30.0
VIT_06s0004g08230.t01	Wine grape	mitochondrion	27.4	29.9
VIT_07s0104g01440.t01	Wine grape	plastid	29.81	29.48

Protein Annotations

EntrezGene:100263403	wikigene:100263403	Gene3D:3.30.710.10	MapMan:35.1	EMBL:AM430297	InterPro:BTB/POZ_NPY2
InterPro:BTB/POZ_dom	ProteinID:CAN66911	ProteinID:CAN66911.1	ProteinID:CCB47706	ProteinID:CCB47706.1	UniProt:F6H664
EMBL:FN595242	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958	GO:GO:0071944
InterPro:IPR000210	InterPro:IPR027356	EntrezGene:LOC100263403	wikigene:LOC100263403	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf
SUPFAM:SSF54695	UniParc:UPI000210957D	ArrayExpress:VIT_03s0091g00680	EnsemblPlantsGene:VIT_03s0091g00680	EnsemblPlants:VIT_03s0091g00680.t01	RefSeq:XP_002264153
RefSeq:XP_002264153.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:7103281..7113666

Molecular Weight (calculated)

68957.0 Da

IEP (calculated)

7.418

GRAVY (calculated)

-0.213

Length

624 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DSFQTDGNSV RYVASELATD IVVNVGEVKF YLHKFPLLSK SECLQKLVAA TNDGNSDEVH IPDIPGGPSA FEICAKFCYG MTVTLNAYNV
101: VAARCAAEYL GMHETIEKGN LIYKIDVFLN SSIFRSWKDS IIVLQTTKSL LPLSEDLKVI SHCIDSIASK ASIDVSRVDW SYTYNRKKLP EENGTDPKWN
201: GVGNRPVVPK DWWVEDLCEL EIDLYKRVIM SIKTQAVISH EVIGEALKAF ALKRLPGFSK GMIPNGDTAK FRSTVDTIVW LLPADKCSVS CSFLLKLLKA
301: AIFMDSGERA KRELVRRIGQ QLEEASVNDL LIRAPEGETA RYDVDTVQQI VEEFLMQEQN AEIESTAAHE LQEVRRPGIL SDASKLMVAK LVDGYLAEIA
401: KDPNLPLSKF VDLAELVSGF SRPAHDGLYR AIDMYLKEHP GISKSERKRI CRLMDCKKLS VDACMHAVQN ERLPLRVVVQ VLFFEQVRAT ATSGSSTPDL
501: PKGIKDLNSA SHGSSRSVTT NTEEDWDAVA TLEELKALKG ELASLRLGNG VGASERNGGD SKGSIDKAAI NKMKGLLMSK KIFTKLWSSK SGQGENSGSD
601: SSGSSVCMYT SRLKCENSKK YMMI

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.