Factsheet for GSMUA_Achr2P13430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P01710_001	Banana	cytosol	63.34	73.15
GSMUA_Achr4P10900_001	Banana	cytosol	51.27	61.76
VIT_07s0129g00250.t01	Wine grape	cytosol	57.08	60.89
GSMUA_Achr4P01950_001	Banana	cytosol	36.36	59.8
Os03t0609800-02	Rice	cytosol	55.74	58.99
EER91236	Sorghum	cytosol	55.29	58.61
VIT_03s0091g00680.t01	Wine grape	cytosol	53.8	57.85
TraesCS5B01G076500.1	Wheat	cytosol	53.2	57.49
TraesCS4B01G078900.3	Wheat	cytosol	54.25	57.41
KRH58085	Soybean	cytosol	53.35	57.37
Os12t0583500-01	Rice	cytosol, plasma membrane	54.55	57.37
TraesCS5D01G082800.1	Wheat	cytosol	53.06	57.23
TraesCS5A01G070700.1	Wheat	cytosol	53.06	57.23
Zm00001d033344_P001	Maize	cytosol	54.1	57.17
TraesCS4D01G077700.3	Wheat	cytosol	53.95	57.1
TraesCS4A01G236100.1	Wheat	cytosol	53.95	57.1
KRH04439	Soybean	cytosol	53.5	57.07
KRH35678	Soybean	cytosol	52.91	56.89
Solyc02g092480.2.1	Tomato	cytosol	53.2	56.85
PGSC0003DMT400064174	Potato	cytosol	53.2	56.85
Bra032187.1-P	Field mustard	cytosol	40.24	56.37
CDX81314	Canola	cytosol	44.11	56.27
KRH58082	Soybean	cytosol	52.46	56.05
HORVU5Hr1G018480.1	Barley	cytosol	52.61	56.03
GSMUA_Achr10P...	Banana	cytosol	47.39	55.89
CDY38923	Canola	cytosol	39.64	55.88
PGSC0003DMT400066161	Potato	cytosol	51.86	55.59
Zm00001d013741_P001	Maize	cytosol	53.2	55.52
Bra037846.1-P	Field mustard	cytosol	43.52	55.51
KRH04442	Soybean	cytosol	52.01	55.4
CDX89539	Canola	cytosol	39.49	55.32
AT2G23050.1	Thale cress	cytosol	39.64	55.3
GSMUA_Achr7P26250_001	Banana	cytosol	51.42	55.29
CDY18660	Canola	cytosol	43.37	55.11
Solyc01g107180.2.1	Tomato	cytosol	51.42	55.11
PGSC0003DMT400038537	Potato	cytosol	51.27	54.86
KRG91101	Soybean	mitochondrion	50.67	53.97
OQU79444	Sorghum	cytosol	51.71	53.88
Solyc03g044090.2.1	Tomato	cytosol	50.22	53.49
CDY37223	Canola	cytosol	47.84	53.23
CDX81462	Canola	cytosol	47.84	53.23
PGSC0003DMT400013928	Potato	cytosol	47.99	52.79
AT5G67440.1	Thale cress	cytosol	45.45	52.68
Solyc10g049660.1.1	Tomato	cytosol	47.84	52.54
Zm00001d030864_P001	Maize	cytosol	50.07	52.42
CDY69095	Canola	cytosol	43.67	52.23
Bra012166.1-P	Field mustard	cytosol	43.82	52.22
CDX72639	Canola	cytosol	44.56	51.73
CDY29566	Canola	cytosol	44.56	51.73
Bra017837.1-P	Field mustard	cytosol	44.41	51.56
CDY22422	Canola	cytosol	43.96	51.3
AT4G37590.1	Thale cress	cytosol	44.26	51.21
CDY12846	Canola	cytosol	43.07	51.15
Bra010603.1-P	Field mustard	cytosol	43.82	51.13
CDY44035	Canola	cytosol	43.82	51.13
CDY50369	Canola	cytosol	39.05	51.07
Bra039820.1-P	Field mustard	cytosol	47.69	51.04
GSMUA_Achr3P04740_001	Banana	cytosol	43.82	49.83
AT2G14820.2	Thale cress	cytosol	46.65	49.37
GSMUA_Achr10P...	Banana	cytosol	34.28	40.85
GSMUA_Achr8P16390_001	Banana	cytosol	30.7	39.46
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	29.36	39.01
GSMUA_Achr6P30010_001	Banana	cytosol	31.3	38.32
GSMUA_Achr2P02890_001	Banana	cytosol	31.59	37.59
GSMUA_Achr3P20380_001	Banana	cytosol	32.19	37.57
GSMUA_Achr5P02440_001	Banana	cytosol	32.04	37.52
GSMUA_Achr9P26110_001	Banana	cytosol	33.53	37.13
GSMUA_Achr3P14590_001	Banana	cytosol	31.45	36.82
GSMUA_Achr3P12020_001	Banana	cytosol	29.81	36.63
GSMUA_AchrUn_...	Banana	cytosol	23.1	36.47
GSMUA_Achr4P31620_001	Banana	cytosol	32.04	36.01
GSMUA_Achr5P00550_001	Banana	cytosol	33.68	35.93
GSMUA_Achr6P27970_001	Banana	cytosol	25.63	33.27
GSMUA_Achr7P26300_001	Banana	cytosol	28.91	32.77
GSMUA_Achr9P26440_001	Banana	cytosol	27.42	31.62
GSMUA_Achr7P21950_001	Banana	plastid	26.38	31.44
GSMUA_Achr8P04840_001	Banana	cytosol	26.53	30.27
GSMUA_Achr1P21440_001	Banana	cytosol	26.53	29.28
GSMUA_Achr8P30170_001	Banana	plastid	24.14	29.03
GSMUA_Achr10P...	Banana	cytosol	23.84	28.93
GSMUA_Achr1P11260_001	Banana	plastid	23.99	28.1
GSMUA_Achr11P...	Banana	cytosol, plastid	23.25	26.94
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	23.1	25.83
GSMUA_Achr3P25690_001	Banana	nucleus	25.04	14.07

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY2	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958
EnsemblPlantsGene:GSMUA_Achr2G13430_001	EnsemblPlants:GSMUA_Achr2P13430_001	EnsemblPlants:GSMUA_Achr2T13430_001	InterPro:IPR000210	InterPro:IPR027356	UniProt:M0S7N4
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000296D751	SEG:seg	:

Description

BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G13430_001]

Coordinates

chr2:+:15566359..15571730

Molecular Weight (calculated)

73384.2 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.151

Length

671 amino acids

Sequence
(BLAST)

001: MKYMKLGSKP DAFQADGNNI RFVATELATD IVINVGDVKF YLHKFPLLSK SPRLQKLVAA TNEENSDEID IPDIPGGPAA FEICAKFCYG MIVTLNAYNV
101: VAARCAAEYL EMHETIEKGN LIYKIDVFLN SSILRAWKDS IIVLQTTKSL LPWAEDLKVV SNCIDSIASK ASIDPSDVEW KQQSVPKDWW VEDLCDLEVD
201: LYKRVIVAIK TEGKMLDVVI GEALKAYAYR RLPGFSKGTV TCGSDSMKTR TVLETIVWLL PTELGSVSCS FLLKMLRAAS ILECGEIYKK ELIKRIGCQL
301: HEAPVSDLLI PAAAGETVYD VDLVSSVVQE FVMQESGTTQ SILVAKLVDE YLAEIAKDPN LPLSKFIELA GLVSAASRPV HDGLYCAIDT YLKEHPDLTK
401: SEKKKICALM DCKKLSADAC IHAVQNERLP LRVVVQVLFF EQMRAAGAMA GGATELPGNI RAAFLRENGG GSQRSSGSGD VNKHGDDKAN DKVKGIPMSK
501: KILNKLWSSK GQGSENSSSD MSESPDSSNQ EEAKSTHSRN TRHSYYYIWF VVDGPPQHML TRSIGCGSIC GVPSRGVEEK VEDTRPMASP RGCIPIGHPA
601: YVIPHAMQPG SRPSESVAAE LSGPIAPSIT QSDGGNASRD VHHRLPRRHG AASLRPITSE LTLSLSRSMY I

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.