Factsheet for GSMUA_Achr3P14590_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P12020_001	Banana	cytosol	71.55	75.09
TraesCS5A01G171100.1	Wheat	cytosol	57.42	57.32
TraesCS5D01G175800.1	Wheat	cytosol	57.59	56.8
KXG35200	Sorghum	cytosol	56.37	55.88
Zm00001d019944_P001	Maize	cytosol	55.85	55.08
TraesCS5B01G168600.3	Wheat	cytosol	57.24	54.67
Os09t0266600-01	Rice	cytosol	35.78	49.28
HORVU0Hr1G012710.2	Barley	cytosol, plastid	48.52	47.77
VIT_00s0194g00080.t01	Wine grape	cytosol	48.69	47.05
KRH01932	Soybean	cytosol	47.12	46.15
KRH51214	Soybean	cytosol	47.12	45.61
Bra024915.1-P	Field mustard	cytosol	44.15	45.1
CDX77798	Canola	cytosol	44.15	45.1
CDY17704	Canola	cytosol	44.15	45.1
KRH36642	Soybean	cytosol	45.9	43.91
KRH11633	Soybean	cytosol	45.72	43.45
KRH62777	Soybean	cytosol	22.16	40.32
GSMUA_Achr8P16390_001	Banana	cytosol	36.3	39.85
GSMUA_Achr10P...	Banana	cytosol	38.74	39.43
GSMUA_Achr4P10900_001	Banana	cytosol	36.82	37.88
GSMUA_Achr4P01950_001	Banana	cytosol	26.7	37.5
AT5G47800.2	Thale cress	cytosol	43.8	37.35
GSMUA_Achr5P01710_001	Banana	cytosol	35.95	35.46
KRG90163	Soybean	cytosol	28.97	34.58
GSMUA_Achr10P...	Banana	cytosol	34.03	34.27
GSMUA_Achr7P26250_001	Banana	cytosol	35.95	33.01
GSMUA_Achr3P04740_001	Banana	cytosol	33.51	32.54
GSMUA_Achr2P13430_001	Banana	cytosol	36.82	31.45
GSMUA_Achr3P20380_001	Banana	cytosol	30.72	30.61
GSMUA_Achr6P30010_001	Banana	cytosol	28.97	30.29
GSMUA_Achr5P02440_001	Banana	cytosol	29.14	29.14
GSMUA_AchrUn_...	Banana	cytosol	21.47	28.94
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	25.48	28.91
GSMUA_Achr2P02890_001	Banana	cytosol	28.1	28.55
GSMUA_Achr6P27970_001	Banana	cytosol	25.65	28.43
GSMUA_Achr4P31620_001	Banana	cytosol	28.8	27.64
GSMUA_Achr9P26110_001	Banana	cytosol	29.14	27.56
GSMUA_Achr5P00550_001	Banana	cytosol	30.02	27.34
GSMUA_Achr1P21440_001	Banana	cytosol	28.8	27.14
GSMUA_Achr8P30170_001	Banana	plastid	25.83	26.52
GSMUA_Achr7P26300_001	Banana	cytosol	27.05	26.18
GSMUA_Achr7P21950_001	Banana	plastid	25.65	26.11
GSMUA_Achr1P11260_001	Banana	plastid	26.0	26.0
GSMUA_Achr8P04840_001	Banana	cytosol	26.0	25.34
GSMUA_Achr10P...	Banana	cytosol	24.43	25.32
GSMUA_Achr9P26440_001	Banana	cytosol	24.78	24.4
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	24.43	23.33
GSMUA_Achr11P...	Banana	cytosol, plastid	23.21	22.97
GSMUA_Achr3P25690_001	Banana	nucleus	22.51	10.8

Protein Annotations

EnsemblPlants:GSMUA_Achr3P14590_001	EnsemblPlants:GSMUA_Achr3T14590_001	EnsemblPlantsGene:GSMUA_Achr3G14590_001	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370	PANTHER:PTHR32370:SF19	PFAM:PF03000	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	UniParc:UPI000294EA33	UniProt:M0SEM6	MapMan:35.1	:	:

Description

Putative BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr3G14590_001]

Coordinates

chr3:-:14601037..14603353

Molecular Weight (calculated)

64509.5 Da

IEP (calculated)

8.263

GRAVY (calculated)

-0.323

Length

573 amino acids

Sequence
(BLAST)

001: MKYMKLGTKP DTFYTEEAVR SVLSDVPTDL IIHVKNTKYL LHKFPLLLKC GLIQRLCSNA DNETGQPIPI ALHDIPGGEE AFELCAKFCY GITINLSAHN
101: FVAAISAAKF LRMTESVAKG NFIVKLDLFF ESCILLGWKD SIMTLQSLWR HSGWSDDHRR MQPCMNSVIE KILIHPSQVA WSYSYTRPGY TKKQQRSAAP
201: KDWWTEDVSE LDLDIFRSII STIRSTKKFP PALIGEALHV YAFKHLPSPL EFQEQAQSSS ARTDDILNKH QRVLEAIVSM IPTEPGSVSA SFLFRLLKIA
301: CYVGASTSTK AELIRRSGRQ LDETTASDLL IPSTTDPRSH DISTVAAVLE SFLLQFRRHM PREETERMIM SMTKVGRIYD DYLQIIASDS TLPVSKFIEL
401: AESLPEMARE EHDGLYQAID TYLKEHAELS KAERKRLCRL IDCRKLSPEA RANAIANDQL PLRTIVQLLF IEQERVGGAG GSKGAPAIST LNEFSDAMAA
501: QDEARRFRHG LEGGHRRRRR LKDSGTSATT KPSKEHTKLK KDKECDWYGR APNSATPTPP SSLSLSELSF IDI

Best Arabidopsis Sequence Match ( AT5G47800.3 )
(BLAST)

001: MKFMKIGTKP DTFYTQEASR ILITDTPNDL VIRINNTTYH LHRSCLVPKC GLLRRLCTDL EESDTVTIEL NDIPGGADAF ELCAKFCYDI TINLSAHNLV
101: NALCASKFLR MSDSVDKGNL LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENLGIVR KCIDSIVEKI LTPTSEVSWS HTYTRPGYAK RQHHSVPRDW
201: WTEDISDLDL DLFRCVITAA RSTFTLPPQL IGEALHVYTC RWLPYFKSNS HSGFSVKENE AALERHRRLV NTVVNMIPAD KGSVSEGFLL RLVSIASYVR
301: ASLTTKTELI RKSSLQLEEA TLEDLLLPSH SSSHLHRYDT DLVATVLESF LMLWRRQSSA HLSSNNTQLL HSIRKVAKLI DSYLQAVAQD VHMPVSKFVS
401: LSEAVPDIAR QSHDRLYKAI NIFLKVHPEI SKEEKKRLCR SLDCQKLSAQ VRAHAVKNER MPLRTVVQAL FFDQESGSKG ASSRSESQEL FTRGKETPTD
501: EHSMMHKLHL GPASTGKAKN VLEEGCKRGE EKTRSSTDPK KIVWKGTGSE HKHHISRDR

Arabidopsis Description

Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G47800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.