Factsheet for Bra024915.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17704	Canola	cytosol	99.82	99.82
AT5G47800.2	Thale cress	cytosol	86.99	72.62
KRH01932	Soybean	cytosol	59.0	56.58
VIT_00s0194g00080.t01	Wine grape	cytosol	59.18	55.99
KRH51214	Soybean	cytosol	58.29	55.24
KRH36642	Soybean	cytosol	56.68	53.09
KRH11633	Soybean	cytosol	56.86	52.9
KRH62777	Soybean	cytosol	26.2	46.67
GSMUA_Achr3P12020_001	Banana	cytosol	45.1	46.34
TraesCS5A01G171100.1	Wheat	cytosol	46.7	45.64
Zm00001d019944_P001	Maize	cytosol	46.88	45.27
TraesCS5D01G175800.1	Wheat	cytosol	46.35	44.75
GSMUA_Achr3P14590_001	Banana	cytosol	45.1	44.15
KXG35200	Sorghum	cytosol	45.45	44.12
TraesCS5B01G168600.3	Wheat	cytosol	46.17	43.17
KRG90163	Soybean	cytosol	36.01	42.08
Os09t0266600-01	Rice	cytosol	31.19	42.07
HORVU0Hr1G012710.2	Barley	cytosol, plastid	40.82	39.35
Bra032187.1-P	Field mustard	cytosol	32.62	38.2
Bra025208.1-P	Field mustard	cytosol	36.9	36.06
Bra012166.1-P	Field mustard	cytosol	34.94	34.81
Bra004064.1-P	Field mustard	cytosol	38.68	34.5
Bra037846.1-P	Field mustard	cytosol	31.73	33.84
Bra010603.1-P	Field mustard	cytosol	34.58	33.74
Bra017837.1-P	Field mustard	cytosol	34.22	33.22
Bra011301.1-P	Field mustard	cytosol	33.33	32.41
Bra039820.1-P	Field mustard	cytosol	34.58	30.94
Bra005737.1-P	Field mustard	cytosol	28.34	27.04
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	31.55	26.78
Bra024285.1-P	Field mustard	cytosol	34.58	26.76
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	31.19	26.68
Bra008815.1-P	Field mustard	cytosol	28.16	26.03
Bra037460.1-P	Field mustard	cytosol	28.52	25.81
Bra037773.1-P	Field mustard	cytosol	33.69	25.64
Bra025440.1-P	Field mustard	cytosol	25.31	24.78
Bra036858.1-P	Field mustard	cytosol	25.13	24.56
Bra012082.1-P	Field mustard	cytosol	29.06	24.36
Bra018309.1-P	Field mustard	cytosol, plastid	25.49	24.2
Bra022805.1-P	Field mustard	cytosol	24.78	24.17
Bra033365.1-P	Field mustard	cytosol	27.09	24.13
Bra012158.1-P	Field mustard	cytosol	25.49	23.79
Bra009047.1-P	Field mustard	cytosol	26.02	23.17
Bra032564.1-P	Field mustard	cytosol, plastid	26.2	23.04
Bra037606.1-P	Field mustard	cytosol	26.2	22.93
Bra023423.1-P	Field mustard	cytosol	22.46	22.83
Bra001349.1-P	Field mustard	plastid	23.35	22.47
Bra036043.1-P	Field mustard	cytosol	21.57	22.08
Bra032401.1-P	Field mustard	cytosol	23.89	22.08
Bra029894.1-P	Field mustard	plastid	25.13	21.83
Bra031830.1-P	Field mustard	cytosol	21.39	21.74
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra024915	EnsemblPlants:Bra024915.1	EnsemblPlants:Bra024915.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4E809	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF19	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000253FA19	SEG:seg

Description

AT5G47800 (E=3e-284) | phototropic-responsive NPH3 family protein

Coordinates

chrA06:-:24236523..24238512

Molecular Weight (calculated)

62960.5 Da

IEP (calculated)

8.966

GRAVY (calculated)

-0.336

Length

561 amino acids

Sequence
(BLAST)

001: MKFMKIGTKP DTFYTQDGSR ILVTDSPNDL VIRINNTSYH LHRSSLVPKC GLLRRLCTDS EESDSVTIEL NDIPGGADAF ELCAKFCYGI TINLSAHNLV
101: DALCASKFLR MSDSVEKGNL LPKLESFFHS CVLQGWKDSI VTLQSTAKLP EWCENLGIIR KCIDSIVEKI LTPTAQVSWS HTYTRPGYQK RKHHSVPRDW
201: WTEDISDLDL DLFRCIITAA RSSFTLPPQL IGEALHVYTC RWLPYFKSKS HSGFSVKENE AALERHRRVV NTVVNMIPAD KGSVSEGFLL RLVSIATYVG
301: ASLTTKTELI RKAGLQLEEA TLADLLLPSQ SSSHHHRYDT DLVAAVLDSF LMLWRRQTSA HVSSNSQLLH SIRKVAKLID SYLQAVSQDV HMPVPNFVSL
401: AEAVPDIARE SHDRLYKAIN MYLKVHPEIS KEEKKRLCRS LDCQKLSAEV RAHAVKNERM PLRTVVQALF FDQESSSKGV LSQAASQVLA SRGKEVPTDE
501: TSMMHKLHLG PSETASIGKA KSMREGGSQR GEDKIRSSTD PRKLVRQGTG SERKYHASRD R

Best Arabidopsis Sequence Match ( AT5G47800.3 )
(BLAST)

001: MKFMKIGTKP DTFYTQEASR ILITDTPNDL VIRINNTTYH LHRSCLVPKC GLLRRLCTDL EESDTVTIEL NDIPGGADAF ELCAKFCYDI TINLSAHNLV
101: NALCASKFLR MSDSVDKGNL LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENLGIVR KCIDSIVEKI LTPTSEVSWS HTYTRPGYAK RQHHSVPRDW
201: WTEDISDLDL DLFRCVITAA RSTFTLPPQL IGEALHVYTC RWLPYFKSNS HSGFSVKENE AALERHRRLV NTVVNMIPAD KGSVSEGFLL RLVSIASYVR
301: ASLTTKTELI RKSSLQLEEA TLEDLLLPSH SSSHLHRYDT DLVATVLESF LMLWRRQSSA HLSSNNTQLL HSIRKVAKLI DSYLQAVAQD VHMPVSKFVS
401: LSEAVPDIAR QSHDRLYKAI NIFLKVHPEI SKEEKKRLCR SLDCQKLSAQ VRAHAVKNER MPLRTVVQAL FFDQESGSKG ASSRSESQEL FTRGKETPTD
501: EHSMMHKLHL GPASTGKAKN VLEEGCKRGE EKTRSSTDPK KIVWKGTGSE HKHHISRDR

Arabidopsis Description

Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G47800]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.