Factsheet for Bra036043.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30615	Canola	cytosol	86.86	95.39
CDY57361	Canola	cytosol	86.31	94.79
AT3G49970.2	Thale cress	extracellular	62.96	66.99
Bra031830.1-P	Field mustard	cytosol	63.32	62.86
Bra012158.1-P	Field mustard	cytosol	65.51	59.73
KRH04469	Soybean	cytosol	56.2	52.83
KRH58066	Soybean	cytosol	55.66	51.69
VIT_07s0129g00380.t01	Wine grape	cytosol	59.85	51.57
KRH77099	Soybean	cytosol	58.03	51.46
GSMUA_Achr7P26300_001	Banana	cytosol	54.93	50.84
Solyc02g092560.2.1	Tomato	cytosol, nucleus	55.29	50.84
KRH28386	Soybean	cytosol	57.85	50.32
PGSC0003DMT400033866	Potato	cytosol	53.83	49.08
Solyc02g064720.2.1	Tomato	cytosol	53.83	48.76
Zm00001d028056_P001	Maize	cytosol	48.18	44.22
TraesCS4A01G049300.1	Wheat	cytosol	48.18	43.42
TraesCS4B01G255500.1	Wheat	cytosol	47.81	43.31
TraesCS4D01G255500.1	Wheat	cytosol	48.36	43.3
HORVU4Hr1G069480.3	Barley	cytosol	48.18	43.07
KXG39906	Sorghum	cytosol	46.9	41.79
Os03t0206700-00	Rice	plasma membrane	46.53	40.73
Bra037460.1-P	Field mustard	cytosol	38.32	33.87
Bra022805.1-P	Field mustard	cytosol	34.49	32.87
Bra018309.1-P	Field mustard	cytosol, plastid	34.85	32.32
Bra033365.1-P	Field mustard	cytosol	36.68	31.9
Bra001349.1-P	Field mustard	plastid	33.03	31.05
Bra032564.1-P	Field mustard	cytosol, plastid	35.95	30.88
Bra032401.1-P	Field mustard	cytosol	34.12	30.81
Bra029894.1-P	Field mustard	plastid	35.58	30.19
Bra032187.1-P	Field mustard	cytosol	25.36	29.02
Bra025440.1-P	Field mustard	cytosol	30.11	28.8
Bra005737.1-P	Field mustard	cytosol	30.11	28.06
Bra012166.1-P	Field mustard	cytosol	27.55	26.82
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	31.75	26.52
Bra036858.1-P	Field mustard	cytosol	27.37	26.13
Bra010603.1-P	Field mustard	cytosol	27.19	25.91
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	31.2	25.87
Bra011301.1-P	Field mustard	cytosol	27.19	25.82
Bra037846.1-P	Field mustard	cytosol	24.64	25.67
Bra017837.1-P	Field mustard	cytosol	27.01	25.61
Bra008815.1-P	Field mustard	cytosol	28.1	25.37
Bra012082.1-P	Field mustard	cytosol	30.84	25.26
Bra009047.1-P	Field mustard	cytosol	29.01	25.24
Bra024285.1-P	Field mustard	cytosol	33.21	25.1
Bra004064.1-P	Field mustard	cytosol	28.47	24.8
Bra037773.1-P	Field mustard	cytosol	32.48	24.15
Bra039820.1-P	Field mustard	cytosol	27.19	23.76
Bra023423.1-P	Field mustard	cytosol	23.91	23.73
Bra025208.1-P	Field mustard	cytosol	24.27	23.17
Bra037606.1-P	Field mustard	cytosol	26.28	22.46
Bra024915.1-P	Field mustard	cytosol	22.08	21.57
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra036043	EnsemblPlants:Bra036043.1	EnsemblPlants:Bra036043.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4F4P3	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002542B04
SEG:seg	:	:	:	:	:

Description

AT3G49970 (E=4e-075) | phototropic-responsive protein, putative

Coordinates

chrA09:-:24919146..24922935

Molecular Weight (calculated)

61666.1 Da

IEP (calculated)

8.743

GRAVY (calculated)

-0.252

Length

548 amino acids

Sequence
(BLAST)

001: MEKLPVEFLP GKKAEQTTFK PAIPKAEPIK RKTHGIEKRE ARKMKTEVYR ESGRCFWISS QEIPSDITVY IGDTSFSLHK ILLSKCGFIK KLTSESSNDS
101: NISVIKIPDF PGGAEAFELA IKSCYGINLE MNAENIAMLR CAAEYLDMTE EHSVANLVET TEVYLSEVIL KSLPSSVKVL QRSEGLVPMS ERVKLVSRCI
201: DAIAYVTCQE SQNKEDVVYL WAEDLSVLRI DMFQRVLIAM MARGFKQHTL GPVLMLYAQK ALRGLEISGR GAKKIEVEQE PEKRVILETI VSLLPRGRNA
301: VSVSFLSMLL RAALYLETTV ACRLDLEKRM GLQLRQAVLD DLLIPSFNGD NTMFDVDTVQ RILMNYLEFE VEGNTVHPNI SEVEKKKICS LMNSQKLSQE
401: ACAHAAQNKR LPVHIVAQVL HQEQQSLRQV LCDSDSPVAA TAIAPESPPP PTLSSYNNEL SKLNRENQDL KLELLKVKMT LKELEREKDF EIKSCSDCSS
501: VSTASVVKSP LRRKSFISSV SRKLGKLNPF GHTQRRTMTR KGRRHSIS

Best Arabidopsis Sequence Match ( AT3G49970.1 )
(BLAST)

001: MLEKLSFLLH KFPLVSKCGF IKKLASESSN DSNIIRIPDF PGGAEGFELV IKFCYDISFE INTENIAMLL CAAEYLEMTE EHSVENLVET IEVYLNEVIL
101: KSLSKSVKVL QKSQDLLPIA ERVRLVDRCI DSIAYAICQE SQSNEDIVDW WADDLAVLKI DMFRRVLVAM IARGFKRYSL GPVLKLYAEK ALRGLDIFGK
201: EAKKMEAEQE HEKRLILETI VSLLPRERNS VSVSFLSILL RAAIYLETTV ACRLDLEKRM GLQLRQAVID DLLIPYYSFN GDNTMLDVDT VQRILMNYLE
301: FEVEGNSADF ASDIGELMET YLAEIASDRN INFAKFIGFA ECIPKQSRMY RAIDIFLKTH PNISEVEKKK VCSLMDCKKL SRDVYAHAAQ NDRFQENLSN
401: SDSPAPATAE KTLSPPELSS YKNELSKLNR ENQYLKLELL KVKMKFKELE KEKAFEVMSG SDCSSSVSTA SVAKPRLPRK SFINSVSQKL GKLINPFGLK
501: QGQTKQPKSR RHSIS

Arabidopsis Description

Putative BTB/POZ domain-containing protein At3g49970 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN21]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.