Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- plasma membrane 2
- nucleus 2
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30615 | Canola | cytosol | 67.38 | 69.54 |
| CDY57361 | Canola | cytosol | 67.18 | 69.34 |
| Bra036043.1-P | Field mustard | cytosol | 66.99 | 62.96 |
| AT5G67385.1 | Thale cress | cytosol | 70.68 | 60.26 |
| KRH04469 | Soybean | cytosol | 60.39 | 53.34 |
| GSMUA_Achr7P26300_001 | Banana | cytosol | 60.19 | 52.36 |
| KRH58066 | Soybean | cytosol | 59.81 | 52.2 |
| Solyc02g092560.2.1 | Tomato | cytosol, nucleus | 59.42 | 51.34 |
| VIT_07s0129g00380.t01 | Wine grape | cytosol | 63.11 | 51.1 |
| KRH77099 | Soybean | cytosol | 60.97 | 50.81 |
| KRH28386 | Soybean | cytosol | 60.19 | 49.21 |
| PGSC0003DMT400033866 | Potato | cytosol | 57.09 | 48.92 |
| Solyc02g064720.2.1 | Tomato | cytosol | 56.89 | 48.43 |
| Zm00001d028056_P001 | Maize | cytosol | 51.46 | 44.39 |
| TraesCS4B01G255500.1 | Wheat | cytosol | 51.84 | 44.13 |
| TraesCS4A01G049300.1 | Wheat | cytosol | 52.04 | 44.08 |
| TraesCS4D01G255500.1 | Wheat | cytosol | 52.23 | 43.95 |
| HORVU4Hr1G069480.3 | Barley | cytosol | 51.65 | 43.39 |
| KXG39906 | Sorghum | cytosol | 51.07 | 42.76 |
| Os03t0206700-00 | Rice | plasma membrane | 51.26 | 42.17 |
| AT5G48800.1 | Thale cress | cytosol | 40.58 | 34.04 |
| AT2G30520.1 | Thale cress | cytosol | 38.06 | 33.05 |
| AT3G08570.1 | Thale cress | plastid | 37.86 | 31.6 |
| AT1G03010.1 | Thale cress | cytosol | 38.84 | 31.55 |
| AT3G08660.1 | Thale cress | plastid | 35.53 | 31.44 |
| AT2G23050.1 | Thale cress | cytosol | 28.16 | 30.15 |
| AT3G50840.1 | Thale cress | cytosol | 31.65 | 28.65 |
| AT2G47860.3 | Thale cress | plastid | 36.31 | 28.42 |
| AT5G67440.1 | Thale cress | cytosol | 30.68 | 27.29 |
| AT4G31820.1 | Thale cress | cytosol | 30.1 | 27.15 |
| AT5G13600.1 | Thale cress | cytosol | 30.87 | 26.9 |
| AT5G03250.1 | Thale cress | cytosol | 30.68 | 26.69 |
| AT1G30440.1 | Thale cress | cytosol, mitochondrion, nucleus | 34.17 | 26.47 |
| AT4G37590.1 | Thale cress | cytosol | 29.71 | 26.38 |
| AT5G10250.2 | Thale cress | cytosol | 31.84 | 26.37 |
| AT2G14820.2 | Thale cress | cytosol | 32.23 | 26.18 |
| AT5G66560.1 | Thale cress | cytosol | 33.2 | 25.6 |
| AT1G67900.2 | Thale cress | nucleus | 31.07 | 25.36 |
| AT5G64330.1 | Thale cress | cytosol | 36.12 | 24.93 |
| AT3G26490.3 | Thale cress | cytosol | 27.96 | 24.49 |
| AT3G44820.1 | Thale cress | cytosol | 30.49 | 24.12 |
| AT5G47800.2 | Thale cress | cytosol | 25.44 | 19.49 |
Protein Annotations
| Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:824159 | ProteinID:AEE78612.2 | ProteinID:ANM65324.1 | ArrayExpress:AT3G49970 |
| EnsemblPlantsGene:AT3G49970 | RefSeq:AT3G49970 | TAIR:AT3G49970 | RefSeq:AT3G49970-TAIR-G | EnsemblPlants:AT3G49970.2 | InterPro:BTB/POZ_dom |
| ProteinID:CAB62105.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR000210 |
| InterPro:IPR027356 | InterPro:NPH3_dom | RefSeq:NP_001319719.1 | RefSeq:NP_001327302.1 | PFAM:PF00651 | PFAM:PF03000 |
| PFscan:PS51649 | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF14 | UniProt:Q9SN21 | InterPro:SKP1/BTB/POZ_sf | SUPFAM:SSF54695 |
| UniParc:UPI00084950DB | SEG:seg | : | : | : | : |
Description
Putative BTB/POZ domain-containing protein At3g49970 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN21]
Coordinates
chr3:-:18527061..18529525
Molecular Weight (calculated)
58520.0 Da
IEP (calculated)
6.776
GRAVY (calculated)
-0.194
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEKLSFLLH KFPLVSKCGF IKKLASESSN DSNIIRIPDF PGGAEGFELV IKFCYDISFE INTENIAMLL CAAEYLEMTE EHSVENLVET IEVYLNEVIL
101: KSLSKSVKVL QKSQDLLPIA ERVRLVDRCI DSIAYAICQE SQSNEDIVDW WADDLAVLKI DMFRRVLVAM IARGFKRYSL GPVLKLYAEK ALRGLDIFGK
201: EAKKMEAEQE HEKRLILETI VSLLPRERNS VSVSFLSILL RAAIYLETTV ACRLDLEKRM GLQLRQAVID DLLIPYYSFN GDNTMLDVDT VQRILMNYLE
301: FEVEGNSADF ASDIGELMET YLAEIASDRN INFAKFIGFA ECIPKQSRMY RAIDIFLKTH PNISEVEKKK VCSLMDCKKL SRDVYAHAAQ NDRFQENLSN
401: SDSPAPATAE KTLSPPELSS YKNELSKLNR ENQYLKLELL KVKMKFKELE KEKAFEVMSG SDCSSSVSTA SVAKPRLPRK SFINSVSQKL GKLINPFGLK
501: QGQTKQPKSR RHSIS
101: KSLSKSVKVL QKSQDLLPIA ERVRLVDRCI DSIAYAICQE SQSNEDIVDW WADDLAVLKI DMFRRVLVAM IARGFKRYSL GPVLKLYAEK ALRGLDIFGK
201: EAKKMEAEQE HEKRLILETI VSLLPRERNS VSVSFLSILL RAAIYLETTV ACRLDLEKRM GLQLRQAVID DLLIPYYSFN GDNTMLDVDT VQRILMNYLE
301: FEVEGNSADF ASDIGELMET YLAEIASDRN INFAKFIGFA ECIPKQSRMY RAIDIFLKTH PNISEVEKKK VCSLMDCKKL SRDVYAHAAQ NDRFQENLSN
401: SDSPAPATAE KTLSPPELSS YKNELSKLNR ENQYLKLELL KVKMKFKELE KEKAFEVMSG SDCSSSVSTA SVAKPRLPRK SFINSVSQKL GKLINPFGLK
501: QGQTKQPKSR RHSIS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.