Factsheet for AT1G67900.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72257	Canola	cytosol	75.12	93.68
CDY72267	Canola	cytosol	74.96	93.48
Bra004064.1-P	Field mustard	cytosol	93.03	93.32
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	73.53	73.65
KRH74516	Soybean	cytosol	71.47	73.33
KRH45579	Soybean	nucleus	72.74	72.4
KRH69640	Soybean	cytosol	72.74	72.17
KRG99441	Soybean	cytosol	71.95	71.84
PGSC0003DMT400047866	Potato	cytosol	70.68	71.02
Solyc05g013570.2.1	Tomato	nucleus	67.99	70.33
GSMUA_Achr10P...	Banana	cytosol	54.2	60.75
AT3G26490.3	Thale cress	cytosol	51.98	55.78
GSMUA_Achr8P16390_001	Banana	cytosol	45.17	54.6
TraesCS6B01G237800.1	Wheat	cytosol	49.29	49.68
TraesCS6D01G192300.1	Wheat	cytosol	49.29	49.6
TraesCS6A01G208800.2	Wheat	cytosol	49.13	49.44
HORVU6Hr1G053490.2	Barley	cytosol	48.97	49.28
Zm00001d017079_P001	Maize	cytosol	47.54	48.08
EES05363	Sorghum	cytosol, nucleus, plastid	48.49	47.59
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	46.28	46.57
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	45.96	46.25
AT2G23050.1	Thale cress	cytosol	35.02	45.95
Zm00001d003297_P001	Maize	mitochondrion	44.37	45.45
EES10995	Sorghum	mitochondrion	45.48	43.88
AT4G37590.1	Thale cress	cytosol	38.35	41.72
AT5G67440.1	Thale cress	cytosol	37.4	40.76
AT2G14820.2	Thale cress	cytosol	40.41	40.22
AT4G31820.1	Thale cress	cytosol	35.18	38.88
AT5G47800.2	Thale cress	cytosol	36.29	34.08
AT5G03250.1	Thale cress	cytosol	31.54	33.61
AT5G13600.1	Thale cress	cytosol	31.38	33.5
AT5G67385.1	Thale cress	cytosol	30.9	32.28
AT5G48800.1	Thale cress	cytosol	30.59	31.43
AT3G49970.2	Thale cress	extracellular	25.36	31.07
AT3G50840.1	Thale cress	cytosol	27.73	30.76
AT5G64330.1	Thale cress	cytosol	36.13	30.56
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	32.17	30.53
AT1G03010.1	Thale cress	cytosol	29.16	29.02
AT5G66560.1	Thale cress	cytosol	30.11	28.44
AT3G08570.1	Thale cress	plastid	27.73	28.36
AT2G30520.1	Thale cress	cytosol	26.62	28.33
AT3G44820.1	Thale cress	cytosol	29.0	28.11
AT3G08660.1	Thale cress	plastid	25.83	28.01
AT2G47860.3	Thale cress	plastid	28.84	27.66
AT5G10250.2	Thale cress	cytosol	26.94	27.33

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:843118	UniProt:A0A178W6L6	ProteinID:AAG52016.1	ProteinID:AEE34717.1
ProteinID:AEE34718.1	ProteinID:AEE34719.1	ProteinID:ANM60180.1	ProteinID:ANM60181.1	ProteinID:ANM60182.1	ArrayExpress:AT1G67900
EnsemblPlantsGene:AT1G67900	RefSeq:AT1G67900	TAIR:AT1G67900	RefSeq:AT1G67900-TAIR-G	EnsemblPlants:AT1G67900.2	TAIR:AT1G67900.2
EMBL:AY120729	Unigene:At.35590	EMBL:BT008787	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0019538	InterPro:IPR027356	InterPro:NPH3_dom	RefSeq:NP_001185347.1
RefSeq:NP_001319340.1	RefSeq:NP_001322484.1	RefSeq:NP_001322485.1	RefSeq:NP_176957.1	RefSeq:NP_974103.1	ProteinID:OAP14139.1
PFAM:PF03000	PO:PO:0000005	PO:PO:0000293	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF9
UniProt:Q9C9V6	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000009EA67	SEG:seg	:

Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]

Coordinates

chr1:+:25464376..25470189

Molecular Weight (calculated)

70318.4 Da

IEP (calculated)

9.089

GRAVY (calculated)

-0.292

Length

631 amino acids

Sequence
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.