Factsheet for Zm00001d017079_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05363	Sorghum	cytosol, nucleus, plastid	93.59	90.82
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	88.78	88.36
TraesCS6B01G237800.1	Wheat	cytosol	79.97	79.71
TraesCS6D01G192300.1	Wheat	cytosol	79.97	79.59
TraesCS6A01G208800.2	Wheat	cytosol	79.97	79.59
HORVU6Hr1G053490.2	Barley	cytosol	79.17	78.79
Zm00001d003297_P001	Maize	mitochondrion	66.19	67.05
GSMUA_Achr10P...	Banana	cytosol	48.88	54.17
GSMUA_Achr8P16390_001	Banana	cytosol	43.27	51.72
CDY72257	Canola	cytosol	40.87	50.4
CDY72267	Canola	cytosol	40.87	50.4
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	50.48	50.0
KRH69640	Soybean	cytosol	50.48	49.53
KRH74516	Soybean	cytosol	48.24	48.94
PGSC0003DMT400047866	Potato	cytosol	48.24	47.93
KRG99441	Soybean	cytosol	48.4	47.78
AT1G67900.2	Thale cress	nucleus	48.08	47.54
Solyc05g013570.2.1	Tomato	nucleus	46.47	47.54
Bra004064.1-P	Field mustard	cytosol	47.76	47.38
KRH45579	Soybean	nucleus	48.08	47.32
CDX83620	Canola	cytosol	37.34	42.6
Bra025208.1-P	Field mustard	cytosol	38.62	41.99
CDY13635	Canola	cytosol	38.62	41.99
AT3G26490.3	Thale cress	cytosol	38.46	40.82
Zm00001d033344_P001	Maize	cytosol	37.02	36.38
Zm00001d048138_P007	Maize	cytosol	35.26	35.26
Zm00001d013741_P001	Maize	cytosol	36.22	35.15
Zm00001d030864_P001	Maize	cytosol	35.1	34.17
Zm00001d045098_P001	Maize	cytosol	34.29	33.59
Zm00001d019944_P001	Maize	cytosol	30.61	32.87
Zm00001d005769_P001	Maize	cytosol	32.21	32.16
Zm00001d020512_P001	Maize	cytosol	32.85	31.59
Zm00001d002146_P001	Maize	cytosol	31.09	31.29
Zm00001d043271_P001	Maize	cytosol	31.73	30.6
Zm00001d033941_P001	Maize	mitochondrion, plastid	29.33	29.0
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	28.85	28.62
Zm00001d023313_P001	Maize	plastid	30.13	28.57
Zm00001d028056_P001	Maize	cytosol	27.24	28.48
Zm00001d035208_P002	Maize	cytosol	29.81	28.05
Zm00001d004440_P001	Maize	cytosol	28.53	27.9
Zm00001d047483_P002	Maize	plastid	28.21	27.2
Zm00001d028075_P010	Maize	endoplasmic reticulum	35.1	27.14
Zm00001d016898_P001	Maize	cytosol	31.25	26.03
Zm00001d005051_P001	Maize	cytosol	24.04	26.0
Zm00001d013182_P003	Maize	cytosol, mitochondrion	29.01	25.75
Zm00001d023314_P001	Maize	cytosol	25.96	25.39

Protein Annotations

EMBL:BT063231	EMBL:BT067756	EMBL:KJ728209	EnsemblPlants:Zm00001d017079_P001	EnsemblPlants:Zm00001d017079_T001	EnsemblPlantsGene:Zm00001d017079
Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR32370
PANTHER:PTHR32370:SF33	PFAM:PF03000	PFscan:PS51649	ProteinID:AQK72248.1	SEG:seg	SUPFAM:SSF54695
UniParc:UPI0001948F91	UniProt:C0P4L2	MapMan:35.1	:	:	:

Description

BTB/POZ domain-containing protein

Coordinates

chr5:+:184659751..184662560

Molecular Weight (calculated)

66947.6 Da

IEP (calculated)

7.900

GRAVY (calculated)

0.011

Length

624 amino acids

Sequence
(BLAST)

001: MKFMRLGTRP DTFFAAADSV RSVCTEVATD LQILVDNCLY HLHKFPLLSK CMLLQALCAD AGDVVVELPG FPGGAEAFEA CAKYCYGITI TVSARNLVPL
101: RCAAAHLGMS EAADRGNLAA KLDAFLASCL LRRWKDALGV LHSTRHHAPL CEDLGLTSRC VDAVAALVAS PDTAPTSTSA SPWWAHDVAE LGVDLFWRIM
201: VAVKATGAVH EKTVGDALKA YARRWLPNVA KDQPLDRDAA DVKQVATRHR LLLEKIVSLL PAERDAVSCG FLLKLLKAAN ILGASKASRA ELVRRVAWQL
301: EEASVSDLLI PSLSCVSDTL YDVGAVSAIL DEFALRCAAL PPAPALALSG SLDDSPAHSG GHRRSRSAES VSFDGTRRSL SAAPVSQGGL VQVGKLVDGF
401: LIEVAKDPNM PMDKLLAIAE AVPDSARPEH DGMYKVVDTY LKAHPEMSKS ARKRLCRVLN CRKLSEKACA HAAQNELLPL RVVVQVLFFE HARAAALASG
501: GHAVAAAADL PSNIRALLSK SGSSEDDEAD RVDEQRLRAL AAGASPGDDW SVEGLRRAAS KIATLRMKLA EDEDEDRDAD EFARKAGLPR SASLRFRAFC
601: AIPAGKPRRM LSKLWPLGRS GVSH

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.