Factsheet for Zm00001d033941_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013027_P002
Zm00001d013489_P001
Zm00001d021864_P001
Zm00001d021867_P001
Zm00001d025877_P001
Zm00001d025878_P001
Zm00001d025884_P001
Zm00001d034575_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66560.1	Zm00001d013489_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d021864_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d021867_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d025877_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d025878_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d025884_P001	AT1G03140.1	21798944
AT5G66560.1	Zm00001d013027_P002	AT5G66720.1	21798944
AT5G66560.1	Zm00001d034575_P001	AT5G66720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91026	Sorghum	cytosol, nucleus, plastid	86.37	91.14
HORVU5Hr1G093880.1	Barley	cytosol	52.3	79.33
TraesCS5D01G389200.2	Wheat	cytosol, plastid	79.08	77.13
TraesCS5A01G379300.1	Wheat	cytosol, plastid	78.76	76.34
TraesCS5B01G383100.1	Wheat	plastid	79.08	76.3
HORVU5Hr1G093850.15	Barley	mitochondrion	78.92	75.91
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	78.92	75.91
TraesCS1B01G298700.1	Wheat	cytosol, plastid	46.43	70.77
TraesCS2D01G507400.1	Wheat	nucleus	61.49	70.55
GSMUA_Achr8P04840_001	Banana	cytosol	48.49	52.04
VIT_00s0207g00230.t01	Wine grape	cytosol	51.82	51.5
CDY45241	Canola	cytosol	47.23	49.83
Solyc02g090070.2.1	Tomato	nucleus	50.71	49.16
KRH28552	Soybean	cytosol	45.96	48.99
KRH08351	Soybean	cytosol	49.92	48.61
PGSC0003DMT400026008	Potato	cytosol	50.71	48.56
Zm00001d013182_P003	Maize	cytosol, mitochondrion	52.77	47.37
CDY30765	Canola	cytosol	47.23	47.0
KRH76914	Soybean	cytosol	37.72	46.67
KRH69999	Soybean	endoplasmic reticulum	49.76	46.18
CDX73781	Canola	cytosol	39.3	45.5
CDX77951	Canola	cytosol	39.46	45.44
AT5G66560.1	Thale cress	cytosol	47.54	44.91
Bra012082.1-P	Field mustard	cytosol	47.54	44.84
AT3G50840.1	Thale cress	cytosol	40.1	44.46
Bra036858.1-P	Field mustard	cytosol	39.94	43.9
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	41.84	41.97
Zm00001d043271_P001	Maize	cytosol	37.72	36.79
Zm00001d035208_P002	Maize	cytosol	38.51	36.65
Zm00001d002146_P001	Maize	cytosol	35.5	36.13
Zm00001d004440_P001	Maize	cytosol	31.7	31.35
Zm00001d047483_P002	Maize	plastid	31.7	30.91
Zm00001d023313_P001	Maize	plastid	32.17	30.85
Zm00001d028056_P001	Maize	cytosol	28.84	30.49
Zm00001d003297_P001	Maize	mitochondrion	28.68	29.38
Zm00001d017079_P001	Maize	cytosol	29.0	29.33
Zm00001d045098_P001	Maize	cytosol	29.32	29.04
Zm00001d016898_P001	Maize	cytosol	33.76	28.44
Zm00001d050959_P001	Maize	cytosol, mitochondrion, plastid	28.05	28.23
Zm00001d033344_P001	Maize	cytosol	28.05	27.87
Zm00001d005051_P001	Maize	cytosol	25.04	27.38
Zm00001d013741_P001	Maize	cytosol	27.89	27.37
Zm00001d030864_P001	Maize	cytosol	27.42	26.99
Zm00001d048138_P007	Maize	cytosol	26.31	26.6
Zm00001d020512_P001	Maize	cytosol	27.26	26.5
Zm00001d005769_P001	Maize	cytosol	26.15	26.4
Zm00001d019944_P001	Maize	cytosol	23.61	25.65
GSMUA_Achr3P25690_001	Banana	nucleus	45.17	23.87
Zm00001d023314_P001	Maize	cytosol	23.77	23.51
Zm00001d028075_P010	Maize	endoplasmic reticulum	25.99	20.32

Protein Annotations

EnsemblPlants:Zm00001d033941_P001	EnsemblPlants:Zm00001d033941_T001	EnsemblPlantsGene:Zm00001d033941	EntrezGene:103643978	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF78	PFAM:PF03000	PFscan:PS51649
ProteinID:ONM09008.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI000221CADF	UniProt:A0A1D6L3I7	MapMan:35.1

Description

BTB/POZ domain-containing protein

Coordinates

chr1:+:279275948..279278883

Molecular Weight (calculated)

68725.5 Da

IEP (calculated)

6.575

GRAVY (calculated)

-0.297

Length

631 amino acids

Sequence
(BLAST)

001: MSSSVRHGSS RGQAWFCTTG LPSDVVFEVH DMTFHLHKFP LMSKSLKIHR MLSEQEDQRP TRGRRQRRRQ VRSSDGDDDG AAETEIEEEE AEPEQQQVRT
101: EGEGDGQPYC IAFPDFPGGP GTFEAAAKFC YGVRVDLTPW NVAPLRCAAE YLEMTEDHAE DNLAARAEAY LDQAVLRHPG DATKALKSCE ELLPLAEDLG
201: IVSRCVEAIA ARSSSASRSW FDDLAVLGLR MYKRVMAAMA ARGDVRAEAR ESCLVSYARG TIPGLSRSMR RRLASAPVSS EVEQKELLEA VVASLPADKC
301: SGRVVTAKFL FALLRTAHIL RASDAARAAL ERKAATQLQQ AALEDVLIPS YSGTAETLYD VDCVQRIVRY FLAEEELGGE ASSSAAIEEE EAVAVARPSA
401: VVMVQVGKLV DNYLAEVASD ANLKPAKFCD LALSLPDHAR IYDDGVYRAV DIYLKAHPRL TAEERDRVVG VVDCRKLTVE ACTHAAQNER LPLRAVLQVL
501: FFEQLQLRRA IAGTLLAPSA GAAPREAAAW RGATALAQDS QVLRLDMDSM ASRVQDLERE CSSMRRAIKK IDGRGGSGSG SRSPGGRSAD GSRPAAGGWR
601: ARHGCKFSTQ VCDSHARNVV ASRASRMGMS P

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.