Factsheet for Bra036858.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77951	Canola	cytosol	93.38	97.81
AT3G50840.1	Thale cress	cytosol	67.94	68.54
Bra012082.1-P	Field mustard	cytosol	65.51	56.2
VIT_00s0207g00230.t01	Wine grape	cytosol	56.62	51.18
KRH28552	Soybean	cytosol	52.09	50.51
KRH08351	Soybean	cytosol	56.79	50.31
Solyc02g090070.2.1	Tomato	nucleus	56.62	49.92
PGSC0003DMT400026008	Potato	cytosol	56.79	49.47
GSMUA_Achr9P26440_001	Banana	cytosol	48.43	47.77
KRH69999	Soybean	endoplasmic reticulum	55.92	47.21
KRH76914	Soybean	cytosol	41.81	47.06
GSMUA_Achr8P04840_001	Banana	cytosol	45.99	44.9
HORVU5Hr1G093880.1	Barley	cytosol	29.62	40.87
OQU91026	Sorghum	cytosol, nucleus, plastid	41.99	40.3
EER93390	Sorghum	cytosol	47.39	40.24
TraesCS5A01G403400.1	Wheat	cytosol	47.39	40.24
TraesCS5B01G408200.1	Wheat	cytosol	47.21	40.21
TraesCS5D01G413400.1	Wheat	cytosol	47.04	40.12
Os03t0767600-01	Rice	cytosol	47.74	40.12
Zm00001d033941_P001	Maize	mitochondrion, plastid	43.9	39.94
TraesCS5D01G389200.2	Wheat	cytosol, plastid	44.95	39.88
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	47.39	39.71
TraesCS5A01G379300.1	Wheat	cytosol, plastid	44.77	39.48
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	44.77	39.18
TraesCS5B01G383100.1	Wheat	plastid	44.25	38.84
HORVU5Hr1G093850.15	Barley	mitochondrion	43.9	38.41
Zm00001d013182_P003	Maize	cytosol, mitochondrion	47.04	38.41
TraesCS2D01G507400.1	Wheat	nucleus	36.24	37.82
TraesCS1B01G298700.1	Wheat	cytosol, plastid	27.18	37.68
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	42.68	37.07
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	42.33	37.04
Bra005737.1-P	Field mustard	cytosol	37.11	36.22
Bra008815.1-P	Field mustard	cytosol	37.28	35.26
Bra025440.1-P	Field mustard	cytosol	34.84	34.9
Bra037606.1-P	Field mustard	cytosol	38.33	34.32
Bra012166.1-P	Field mustard	cytosol	30.49	31.08
Bra037846.1-P	Field mustard	cytosol	28.22	30.8
Bra023423.1-P	Field mustard	cytosol	28.92	30.07
Bra032187.1-P	Field mustard	cytosol	25.09	30.06
Bra037460.1-P	Field mustard	cytosol	32.23	29.84
Bra022805.1-P	Field mustard	cytosol	29.44	29.39
Bra012158.1-P	Field mustard	cytosol	30.66	29.28
Bra018309.1-P	Field mustard	cytosol, plastid	30.14	29.27
Bra001349.1-P	Field mustard	plastid	29.44	28.99
Bra032401.1-P	Field mustard	cytosol	30.49	28.83
Bra010603.1-P	Field mustard	cytosol	28.57	28.52
Bra033365.1-P	Field mustard	cytosol	30.84	28.1
Bra004064.1-P	Field mustard	cytosol	30.66	27.98
Bra029894.1-P	Field mustard	plastid	31.36	27.86
Bra024285.1-P	Field mustard	cytosol	35.19	27.86
Bra025208.1-P	Field mustard	cytosol	27.7	27.7
Bra017837.1-P	Field mustard	cytosol	27.87	27.68
Bra039820.1-P	Field mustard	cytosol	29.97	27.43
Bra036043.1-P	Field mustard	cytosol	26.13	27.37
Bra031830.1-P	Field mustard	cytosol	26.31	27.36
Bra037773.1-P	Field mustard	cytosol	35.02	27.27
Bra032564.1-P	Field mustard	cytosol, plastid	30.14	27.12
Bra011301.1-P	Field mustard	cytosol	26.83	26.69
Bra009047.1-P	Field mustard	cytosol	27.87	25.4
Bra024915.1-P	Field mustard	cytosol	24.56	25.13
GSMUA_Achr3P25690_001	Banana	nucleus	41.46	19.93
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra036858	EnsemblPlants:Bra036858.1	EnsemblPlants:Bra036858.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	UniProt:M4F6Z8
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF8	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002542BF3	SEG:seg

Description

AT3G50840 (E=3e-186) | phototropic-responsive NPH3 family protein

Coordinates

chrA09:-:25369644..25371676

Molecular Weight (calculated)

64514.4 Da

IEP (calculated)

5.934

GRAVY (calculated)

-0.227

Length

574 amino acids

Sequence
(BLAST)

001: MGAEKQSSKG QAWFCTTGLS SDMEIEVDDM TYHLNKFLLM SKSRKLHQLI TEQGQSDEKK KKRHEEDGDG YTLHIKLENF PGGPEIFEMV VKVCYGVKVN
101: LSASTAVLLR CAAEELEMTE EYSADNLILT TENFLSHSVL SNTQETIAAL KACEPVTSLA ESIGITKQCI DSIVSIASSS ADPSLFGWPM NNSTKQHSKV
201: LSEDLLELSF PIFKRVVQAM KAKGLSDNIV ETSLIRYAKK HIPLITSRSS ASSTIASENQ QRELLETIIS YLPIHNSSAT STTRSLFGLL RSAIILNTSE
301: KCRTVLEIKI GSHLEKATLD DLLIPSYSYL NETLYDIDLV ERLIRHFLEN DAVSFLSSPS LTVVGKLIDG VLCEIASDSN LKPERFYSLA VSLPDEARLY
401: DDGLYRAIDI YLKSHPRILE AEREKICSVM DFQKLTIEGC THAAQNERLP LRAVVKVLFL EQLQLRTLVT AVTEEDGGET AGEAKVDFGV WEKVVKENEV
501: LRLDMDAMRT RLYHLESEYL NLKEVIAKID KERLYVANAR PRKWSISNKF GCKFKTQVCD SHEAKMVDGR CQRR

Best Arabidopsis Sequence Match ( AT3G50840.1 )
(BLAST)

001: MANSKKQAWF FYTTGLPSDI EIEVDDITFH LHKFPLMSKS KKLHQLITEQ EQSKVYSHIK LENFPGGSEI FEMVIKISYG FKVDISVSTA VPLRCAAEYL
101: EMTEEYSPEN LISKTEKFLS EFVFTNVQES IKALKACESV SSLAESLCIT EQCIDSIVFQ ASSTDPSSFY GWPINNGGIF TVDRKKQSKD SKTELWFEDL
201: TELSFPIFRR VILSMKSSVL SPEIVERSLL TYAKKHIPGI SRSSSASSSS SSSSTTIASE NQQRELLETI TSDLPLTATT TRSLFGLLRA AIILNASENC
301: RKFLEKKIGS NLEKATLDDL LIPSYSYLNE TLYDIDLVER LLRRFLENVA VSSSSLTVVG RLIDGVLGEI ASDANLKPEQ FYNLAVLLPV QARVYDDGLY
401: RAVDIYFKTH SWILEEEKEK ICSVMDCRKL TVEGCTHAAQ NERLPLRAVV QVLFLEQLQL RQVITGTLLT EEDGDKTVVD LGRWKEAVKE NQVLRLDMDT
501: MRTRVNQLEK ECLYLKKVIA KIDKESLLKA KHGAGKWSIG KKFGCKFSAQ VCDSQEATMV DRRSRRFLS

Arabidopsis Description

BTB/POZ domain-containing protein At3g50840 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.