Factsheet for Bra005737.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11245	Canola	cytosol	99.83	98.16
AT5G03250.1	Thale cress	cytosol	91.33	90.71
KRH21111	Soybean	cytosol	63.27	60.88
KRH19874	Soybean	cytosol	60.2	60.1
KRH32482	Soybean	cytosol	60.03	59.93
VIT_08s0040g01800.t01	Wine grape	cytosol	63.1	59.46
Solyc09g007820.1.1	Tomato	cytosol	58.84	57.96
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	60.03	57.87
PGSC0003DMT400093531	Potato	cytosol	51.36	56.13
GSMUA_AchrUn_...	Banana	cytosol	39.12	54.12
GSMUA_Achr2P02890_001	Banana	cytosol	51.02	53.19
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	44.39	51.68
Zm00001d043271_P001	Maize	cytosol	54.59	49.61
Bra008815.1-P	Field mustard	cytosol	51.02	49.42
TraesCS3B01G349200.1	Wheat	cytosol	53.91	49.0
Os01t0780600-01	Rice	plasma membrane	54.59	48.71
HORVU3Hr1G076740.1	Barley	cytosol	53.23	48.68
TraesCS3A01G317300.1	Wheat	cytosol	53.57	48.54
EES03716	Sorghum	cytosol	53.57	48.39
TraesCS3D01G314000.1	Wheat	cytosol	53.57	48.31
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	52.38	46.95
Zm00001d002146_P001	Maize	cytosol	49.15	46.61
Os04t0636500-01	Rice	plasma membrane	51.02	46.58
Bra023423.1-P	Field mustard	cytosol	42.86	45.65
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	51.19	45.54
TraesCS2B01G557300.2	Wheat	cytosol	49.66	45.13
TraesCS2A01G526900.1	Wheat	cytosol	49.49	44.63
TraesCS2D01G529600.1	Wheat	cytosol	49.32	44.62
EES11510	Sorghum	cytosol	48.13	44.5
Bra025440.1-P	Field mustard	cytosol	41.67	42.76
Bra032187.1-P	Field mustard	cytosol	30.27	37.16
Bra036858.1-P	Field mustard	cytosol	36.22	37.11
Bra037606.1-P	Field mustard	cytosol	40.31	36.97
Bra012082.1-P	Field mustard	cytosol	40.65	35.73
Bra037846.1-P	Field mustard	cytosol	31.8	35.55
Bra012166.1-P	Field mustard	cytosol	33.84	35.35
Bra025208.1-P	Field mustard	cytosol	33.16	33.97
Bra017837.1-P	Field mustard	cytosol	32.48	33.05
Bra011301.1-P	Field mustard	cytosol	32.31	32.93
Bra010603.1-P	Field mustard	cytosol	32.14	32.87
Bra012158.1-P	Field mustard	cytosol	33.16	32.45
Bra037460.1-P	Field mustard	cytosol	33.84	32.1
Bra001349.1-P	Field mustard	plastid	31.8	32.08
Bra004064.1-P	Field mustard	cytosol	33.33	31.16
Bra033365.1-P	Field mustard	cytosol	33.33	31.11
Bra029894.1-P	Field mustard	plastid	33.67	30.65
Bra018309.1-P	Field mustard	cytosol, plastid	30.78	30.63
Bra024285.1-P	Field mustard	cytosol	37.76	30.62
Bra022805.1-P	Field mustard	cytosol	29.93	30.61
Bra031830.1-P	Field mustard	cytosol	28.4	30.25
Bra032564.1-P	Field mustard	cytosol, plastid	32.82	30.25
Bra036043.1-P	Field mustard	cytosol	28.06	30.11
Bra037773.1-P	Field mustard	cytosol	37.59	29.99
Bra032401.1-P	Field mustard	cytosol	30.95	29.98
Bra039820.1-P	Field mustard	cytosol	31.8	29.82
Bra009047.1-P	Field mustard	cytosol	31.12	29.05
Bra024915.1-P	Field mustard	cytosol	27.04	28.34
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra005737	EnsemblPlants:Bra005737.1	EnsemblPlants:Bra005737.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4CNE9	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF46	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI000253FAB6
SEG:seg	:	:	:	:	:

Description

AT5G03250 (E=6e-311) | phototropic-responsive NPH3 family protein

Coordinates

chrA03:-:360952..363606

Molecular Weight (calculated)

66104.2 Da

IEP (calculated)

4.990

GRAVY (calculated)

-0.258

Length

588 amino acids

Sequence
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GFLEKLIEES SSDDGSSCVL SLDDIPGGGK TFELITKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEDV TDHAEDLHII SRCVDSLAIK ACADPSLFNW PKNATSGQNT EDESHLWNGI
201: SPSGKMLQPT GEDWWFDDAS FLNLSLFKRL ITAIESRGMK LENISMAVMY YTKKHVPLMN RQVTMDEQVI ETPNTSEAEQ KDALEEIIGL LPTKKGVNPT
301: KFLLRLLQTA MVLHTSQSSR ENLERLIGNQ LEQAALVDLL IPNMGYSETL YDVECVLRMI EQFVSSTEQA GIVPSPCIIE EGHLVKDGAE MLTPPTLVAT
401: LVDGYLAEVA PDVNLKLAKF EAIAAAVPDY ARPLDDGVYH AVDVFLKAHP WITDSEREHI CRLMNCQKLS LEASAHAAQN ERLPLRVIVQ VLFFEQLRLR
501: TSISSWFFVS ENLDNPEHQN GGNGCVLKPR GENVRERVSE LEKECISMKQ ELQKLVRSKR SWKNFTRKLN FKKKSECCKP KDQEKQAN

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.