Factsheet for Bra032187.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38923	Canola	cytosol	98.33	98.95
AT2G23050.1	Thale cress	cytosol	83.51	83.16
Bra010603.1-P	Field mustard	cytosol	68.89	57.39
Bra017837.1-P	Field mustard	cytosol	67.43	55.88
Bra037846.1-P	Field mustard	cytosol	54.49	49.62
KRH04439	Soybean	cytosol	63.67	48.49
KRH58085	Soybean	cytosol	62.84	48.24
Bra012166.1-P	Field mustard	cytosol	56.37	47.96
GSMUA_Achr4P10900_001	Banana	cytosol	55.74	47.94
VIT_07s0129g00250.t01	Wine grape	cytosol	62.63	47.69
KRH04442	Soybean	cytosol	61.8	46.98
Solyc02g092480.2.1	Tomato	cytosol	61.59	46.97
KRH58082	Soybean	cytosol	61.59	46.97
PGSC0003DMT400064174	Potato	cytosol	61.17	46.66
OQU93039	Sorghum	cytosol	57.2	44.99
Solyc03g044090.2.1	Tomato	cytosol	59.08	44.92
Os03t0205700-01	Rice	cytosol	56.58	44.79
GSMUA_Achr5P01710_001	Banana	cytosol	54.28	44.75
PGSC0003DMT400038537	Potato	cytosol	58.46	44.66
GSMUA_Achr10P...	Banana	cytosol	53.03	44.64
TraesCS4B01G256600.1	Wheat	cytosol	55.74	44.13
TraesCS4D01G256700.1	Wheat	cytosol	55.74	44.06
TraesCS4A01G048200.1	Wheat	cytosol	55.74	44.06
HORVU4Hr1G069760.10	Barley	cytosol	55.74	43.63
Zm00001d048138_P007	Maize	cytosol	56.58	43.43
EER91236	Sorghum	cytosol	56.99	43.13
Os12t0583500-01	Rice	cytosol, plasma membrane	57.2	42.95
TraesCS5A01G070700.1	Wheat	cytosol	55.74	42.93
Bra039820.1-P	Field mustard	cytosol	56.16	42.9
TraesCS5B01G076500.1	Wheat	cytosol	55.32	42.67
TraesCS5D01G082800.1	Wheat	cytosol	55.32	42.6
TraesCS4A01G236100.1	Wheat	cytosol	56.37	42.59
TraesCS4D01G077700.3	Wheat	cytosol	56.16	42.43
Zm00001d033344_P001	Maize	cytosol	56.16	42.36
TraesCS4B01G078900.3	Wheat	cytosol	55.95	42.27
GSMUA_Achr7P26250_001	Banana	cytosol	54.7	41.99
Zm00001d013741_P001	Maize	cytosol	55.95	41.68
Os03t0609800-02	Rice	cytosol	55.11	41.64
HORVU5Hr1G018480.1	Barley	cytosol	54.7	41.59
Zm00001d030864_P001	Maize	cytosol	54.7	40.87
GSMUA_Achr2P13430_001	Banana	cytosol	56.37	40.24
OQU79444	Sorghum	cytosol	54.07	40.22
Bra011301.1-P	Field mustard	cytosol	45.93	38.13
Bra004064.1-P	Field mustard	cytosol	44.47	33.86
Zm00001d028075_P010	Maize	endoplasmic reticulum	56.99	33.83
Bra024915.1-P	Field mustard	cytosol	38.2	32.62
Bra025208.1-P	Field mustard	cytosol	38.2	31.88
Bra005737.1-P	Field mustard	cytosol	37.16	30.27
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	39.67	28.96
Bra008815.1-P	Field mustard	cytosol	35.91	28.34
Bra012158.1-P	Field mustard	cytosol	35.49	28.29
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	38.2	27.69
Bra024285.1-P	Field mustard	cytosol	40.29	26.62
Bra022805.1-P	Field mustard	cytosol	31.94	26.61
Bra037460.1-P	Field mustard	cytosol	34.24	26.45
Bra031830.1-P	Field mustard	cytosol	30.27	26.27
Bra037773.1-P	Field mustard	cytosol	40.08	26.05
Bra023423.1-P	Field mustard	cytosol	29.65	25.72
Bra018309.1-P	Field mustard	cytosol, plastid	31.73	25.72
Bra025440.1-P	Field mustard	cytosol	30.48	25.48
Bra036043.1-P	Field mustard	cytosol	29.02	25.36
Bra036858.1-P	Field mustard	cytosol	30.06	25.09
Bra033365.1-P	Field mustard	cytosol	32.78	24.92
Bra032564.1-P	Field mustard	cytosol, plastid	32.57	24.45
Bra032401.1-P	Field mustard	cytosol	30.69	24.22
Bra001349.1-P	Field mustard	plastid	29.44	24.19
Bra029894.1-P	Field mustard	plastid	32.36	23.99
Bra009047.1-P	Field mustard	cytosol	30.48	23.17
Bra012082.1-P	Field mustard	cytosol	32.36	23.17
Bra037606.1-P	Field mustard	cytosol	30.69	22.93
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra032187	EnsemblPlants:Bra032187.1	EnsemblPlants:Bra032187.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958	GO:GO:0071944	InterPro:IPR000210
InterPro:IPR027356	UniProt:M4ETQ5	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF26	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI0002544400
SEG:seg	:	:	:	:	:

Description

AT2G23050 (E=8e-220) NPY4 | NPY4 (NAKED PINS IN YUC MUTANTS 4); protein binding / signal transducer

Coordinates

chrA04:+:10194222..10196113

Molecular Weight (calculated)

54624.6 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.287

Length

479 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DTVQSKGDNV RYVATELETE LIVTIGNIKF YLHKFPLLSK SGYLQKLIAT SRNEEKKNQV DEIDISEIPG GSVAFEVCVK FCYGITVTLN
101: AYNVFAARCA AEFLEMNETF EKSNLVYKID VFLNSTIFRS WKDSIIVFST TRDLSPNYTN EFTLKLVKRC LDSIAYTASI DTSKVEWSYT YNRKKKLDEK
201: AVPRDWWVED LCELHIDLYK QAIEAIETRG KVPVEVIGEA LHAYARRRIG GFSKGSVRVI DKCLTESIIE LLPDKKGSVS SSFLSKLLRA SVFLGCEETV
301: KERLKKRISE QLEETAVSDI LMFDIDMVQS LVKEFMDRDP KSHPKASVAK LVDGYLAEKS RDPNLLLQNF LSLAETVSSF PRQSHDGLYR AIDMFLKEHP
401: GIDKSEKKRV CGLMDCRKLS AEACEHAVQN ERLPMRVIVQ VLFFEQIRVN GSSTGYSTPE LTTTTLNTED DEWDHVKEY

Best Arabidopsis Sequence Match ( AT2G23050.1 )
(BLAST)

001: MKFMKLGTKP DSFLSKGDNV RYVTNELETE IIIIIGNVKF YLHKFPLLSK SGFLQKHIAT SKNEEEKKNQ IDEIDISEIP GGSVAFEICV KFCYGITVTL
101: NAYNVVAVRC AAEFLEMNET FEKSNLVYKI DVFLNSTIFR SWKDSIIVLQ TTKDLLSDDS EELVKRCLGS IASTASIDTS KVKWSYTYNR KKKLEKVRKP
201: EDGVPKDWWV EDLCELHIDL YKQAIKAIKN RGKVPSNVIG EALHAYAIRR IAGFSKESMQ LIDRSLINTI IELLPDEKGN ISSSFLTKLH RASIFLGCEE
301: TVKEKLKKRV SEQLEETTVN DILMYDLDMV QSLVKEFMNR DPKTHSKVSV AKLIDGYLAE KSRDPNLPLQ NFLSLAETLS SFPRHSHDVL YRAIDMFLKE
401: HSGISKSEKK RVCGLMDCRK LSAEACEHAV QNERLPMRVI VQVLFFEQIR ANGSSTGYST PELTTTTLNT EDDEWDHEKE F

Arabidopsis Description

NPY4BTB/POZ domain-containing protein NPY4 [Source:UniProtKB/Swiss-Prot;Acc:O64814]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.