Factsheet for Solyc03g044090.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038537	Potato	cytosol	93.81	94.26
Solyc02g092480.2.1	Tomato	cytosol	74.76	75.0
VIT_07s0129g00250.t01	Wine grape	cytosol	67.94	68.04
KRH58085	Soybean	cytosol	64.13	64.74
KRH04439	Soybean	cytosol	64.44	64.55
KRH58082	Soybean	cytosol	64.13	64.33
KRH04442	Soybean	cytosol	63.17	63.17
CDX81314	Canola	cytosol	51.11	61.22
Solyc01g107180.2.1	Tomato	cytosol	60.32	60.7
Bra037846.1-P	Field mustard	cytosol	50.63	60.65
CDY18660	Canola	cytosol	50.79	60.61
CDX89539	Canola	cytosol	45.08	59.29
AT2G23050.1	Thale cress	cytosol	45.24	59.25
Bra032187.1-P	Field mustard	cytosol	44.92	59.08
CDY38923	Canola	cytosol	44.29	58.61
GSMUA_Achr4P10900_001	Banana	cytosol	50.79	57.45
CDY69095	Canola	cytosol	50.79	57.04
Bra012166.1-P	Field mustard	cytosol	50.79	56.84
Solyc10g049660.1.1	Tomato	cytosol	54.6	56.3
AT5G67440.1	Thale cress	cytosol	51.43	55.96
CDY12846	Canola	cytosol	50.16	55.93
CDY22422	Canola	cytosol	50.95	55.83
AT4G37590.1	Thale cress	cytosol	51.27	55.69
Bra010603.1-P	Field mustard	cytosol	50.79	55.65
CDX72639	Canola	cytosol	50.95	55.54
CDY44035	Canola	cytosol	50.63	55.48
GSMUA_Achr5P01710_001	Banana	cytosol	50.95	55.25
EER91236	Sorghum	cytosol	55.24	54.98
CDY29566	Canola	cytosol	50.32	54.84
TraesCS4A01G236100.1	Wheat	cytosol	55.08	54.73
Bra017837.1-P	Field mustard	cytosol	50.16	54.67
TraesCS4B01G078900.3	Wheat	cytosol	54.92	54.57
Os03t0609800-02	Rice	cytosol	54.6	54.26
TraesCS4B01G256600.1	Wheat	cytosol	51.75	53.88
OQU93039	Sorghum	cytosol	52.06	53.86
Zm00001d033344_P001	Maize	cytosol	54.29	53.86
TraesCS4D01G256700.1	Wheat	cytosol	51.75	53.8
TraesCS4D01G077700.3	Wheat	cytosol	54.13	53.79
GSMUA_Achr10P...	Banana	cytosol	48.57	53.78
Zm00001d013741_P001	Maize	cytosol	54.76	53.65
TraesCS4A01G048200.1	Wheat	cytosol	51.43	53.47
Os12t0583500-01	Rice	cytosol, plasma membrane	53.97	53.29
Os03t0205700-01	Rice	cytosol	50.95	53.06
HORVU4Hr1G069760.10	Barley	cytosol	51.27	52.78
TraesCS5B01G076500.1	Wheat	cytosol	51.9	52.66
TraesCS5A01G070700.1	Wheat	cytosol	51.75	52.41
TraesCS5D01G082800.1	Wheat	cytosol	51.59	52.25
GSMUA_Achr7P26250_001	Banana	cytosol	51.11	51.6
HORVU5Hr1G018480.1	Barley	cytosol	51.59	51.59
Zm00001d048138_P007	Maize	cytosol	50.95	51.44
OQU79444	Sorghum	cytosol	51.9	50.78
GSMUA_Achr2P13430_001	Banana	cytosol	53.49	50.22
Zm00001d030864_P001	Maize	cytosol	50.48	49.61
Solyc08g006870.2.1	Tomato	cytosol	46.35	47.48
Solyc05g013570.2.1	Tomato	nucleus	40.32	41.64
Zm00001d028075_P010	Maize	endoplasmic reticulum	51.59	40.27
Solyc10g047530.1.1	Tomato	cytosol	37.46	35.01
Solyc01g105680.2.1	Tomato	nucleus	36.98	34.83
Solyc02g021640.2.1	Tomato	nucleus	33.97	34.02
Solyc09g007820.1.1	Tomato	cytosol	31.9	33.67
Solyc09g061250.2.1	Tomato	cytosol	30.32	31.47
Solyc02g092560.2.1	Tomato	cytosol, nucleus	29.37	31.04
Solyc07g043130.2.1	Tomato	cytosol	27.94	30.56
Solyc09g074630.2.1	Tomato	cytosol	24.76	30.53
Solyc02g090070.2.1	Tomato	nucleus	31.27	30.26
Solyc09g048980.2.1	Tomato	cytosol	25.24	30.11
Solyc05g051580.2.1	Tomato	cytosol	28.73	29.01
Solyc01g098820.2.1	Tomato	cytosol, extracellular	25.4	28.88
Solyc02g064720.2.1	Tomato	cytosol	27.62	28.76
Solyc11g066730.1.1	Tomato	cytosol	26.83	26.78

Protein Annotations

EnsemblPlants:Solyc03g044090.2.1	EnsemblPlantsGene:Solyc03g044090.2	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR32370
PANTHER:PTHR32370:SF26	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	SEG:seg
SUPFAM:SSF54695	UniParc:UPI0002768171	UniProt:K4BG29	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3:+:8038875..8043168

Molecular Weight (calculated)

70565.4 Da

IEP (calculated)

7.254

GRAVY (calculated)

-0.291

Length

630 amino acids

Sequence
(BLAST)

001: MKYMKLGSKP DQFQTQGDSI RYVAAELATD MIINVGDVKF YLHKFPLLLK SYRLQKLIAC TNEENIDEIN IHDIPGGPAA FEVCAKFCYN MTVTLNAYNV
101: VAARCAAEYL EMYESVEKGN LIYKIEVFLT SSIFRSWKDS IIVLQTTKAF LPWSEELKIV SHCLESVASK ASVDTSKVDW SYTYNHKKLP SENGSDLHCN
201: AISCQQLVPI DWWVEDLCEL HIDLYKRVIV TIKTKGRISS EAIGEALKAY ANRRLPGFSK GSIRGSDPEK YRYMVDTITW LLPKEKNSVS CSFLIKLLQT
301: SIACECGQTM RSELKRRISL HMEDATVGDL LIRAPDSETI IFDIDIVHDL VENFMLHQKR GQIDSSADNK FHDIWPPFAS DDSEVKVARV IDGYLAEVAR
401: DPNLPVSKFI NLAELVSSFS RPSHDGIYRA IDMYLKEHPG ITKSERKRIC RLMDCRKLSA EACMHAVQNE RLPVRIVVQV LFFEQLRATA SSGGGSTPDL
501: TRPVKSLLPV GSQRCSTSAT SNIEDNSDAV LTAKELKDLK GELATLRLRD RGDNNCSNLN DMIKNAATVD DSKVRSSVMS KKMFSKLWSN KDRQSENSSS
601: DTSESPSSSN AGETKSTSCR VGGIPSLNIS

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.