Factsheet for Solyc08g006870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022573	Potato	cytosol	96.75	96.75
VIT_04s0008g06630.t01	Wine grape	cytosol	74.63	74.03
KRH05372	Soybean	cytosol	68.29	68.18
KRH15648	Soybean	cytosol	67.32	67.32
GSMUA_Achr4P01950_001	Banana	cytosol	44.55	67.16
KRH52322	Soybean	cytosol	65.37	65.79
KRH61660	Soybean	cytosol	64.55	62.92
GSMUA_Achr3P04740_001	Banana	cytosol	59.35	61.86
AT4G31820.1	Thale cress	cytosol	56.1	60.42
CDX68790	Canola	cytosol	54.8	58.92
Bra011301.1-P	Field mustard	cytosol	54.63	58.23
CDX75198	Canola	cytosol	54.63	58.23
Os09t0420900-01	Rice	cytosol	56.1	55.83
EER98911	Sorghum	cytosol	55.77	55.41
Zm00001d005769_P001	Maize	cytosol	55.45	54.56
HORVU5Hr1G064620.1	Barley	cytosol	55.45	53.53
TraesCS5B01G222700.2	Wheat	cytosol	55.45	53.53
TraesCS5D01G231300.1	Wheat	cytosol	55.28	53.38
Zm00001d020512_P001	Maize	cytosol	55.12	52.23
EER89339	Sorghum	cytosol	52.85	51.18
TraesCS5A01G223800.1	Wheat	cytosol	55.12	51.13
Zm00001d045098_P001	Maize	cytosol	52.85	51.02
Os06t0184500-00	Rice	cytosol	53.01	50.62
TraesCS7A01G149100.1	Wheat	cytosol	53.5	50.23
TraesCS7D01G150700.2	Wheat	cytosol	53.33	50.15
TraesCS7B01G052800.1	Wheat	cytosol	53.01	49.92
Solyc02g092480.2.1	Tomato	cytosol	48.29	47.29
HORVU7Hr1G030460.8	Barley	cytosol	50.73	47.27
Solyc01g107180.2.1	Tomato	cytosol	47.64	46.81
Solyc10g049660.1.1	Tomato	cytosol	46.18	46.48
Solyc03g044090.2.1	Tomato	cytosol	47.48	46.35
Solyc05g013570.2.1	Tomato	nucleus	41.95	42.3
HORVU7Hr1G097110.6	Barley	cytosol	36.1	40.96
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	42.44	40.22
Solyc02g021640.2.1	Tomato	nucleus	34.63	33.86
Solyc09g007820.1.1	Tomato	cytosol	32.85	33.84
Solyc10g047530.1.1	Tomato	cytosol	35.45	32.34
Solyc01g105680.2.1	Tomato	nucleus	34.47	31.69
Solyc02g092560.2.1	Tomato	cytosol, nucleus	30.41	31.38
Solyc09g048980.2.1	Tomato	cytosol	26.83	31.25
Solyc09g061250.2.1	Tomato	cytosol	30.41	30.81
Solyc02g090070.2.1	Tomato	nucleus	32.2	30.41
Solyc02g064720.2.1	Tomato	cytosol	29.43	29.92
Solyc05g051580.2.1	Tomato	cytosol	30.24	29.81
Solyc07g043130.2.1	Tomato	cytosol	27.64	29.51
Solyc09g074630.2.1	Tomato	cytosol	22.93	27.59
Solyc11g066730.1.1	Tomato	cytosol	27.8	27.1
Solyc01g098820.2.1	Tomato	cytosol, extracellular	23.74	26.35

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0009987	GO:GO:0060918	GO:GO:0099402	InterPro:IPR000210	InterPro:IPR027356
UniProt:K4CIH5	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF7	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	EnsemblPlantsGene:Solyc08g006870.2	EnsemblPlants:Solyc08g006870.2.1
UniParc:UPI000276C240	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:+:1416352..1421980

Molecular Weight (calculated)

69003.4 Da

IEP (calculated)

9.225

GRAVY (calculated)

-0.267

Length

615 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DTFQDQGKGV RYVSSELATD VTIIVGEVIF YLHKFPLLSM SNKLQKLVSK ANEENSDVIQ LVDFPGGPRA FEICAKFCYG MTVTLNPYNV
101: VAARCAAEYL EMAEEVDRGN LIFKIEVFLN SSVFRSWKDS IIVLQTTKSL RPWSEDLKVV GRCIDSIASK TSMDPSSITW SYTYNRKVAV SDKITEVGMK
201: FPGKLESVPK DWWVEDICEL EIDLYKRVMV AVKSKGRMDG SVIGEALRTY AMRWLPNSIE ALVSEAHSRR NKSLLETIIC LLPYDKGVTC SCCFLLKLLK
301: VAILVGADDS SRDELVKSIS LKLDEASVND LLIPARSPQA TVYDVELVKC LVNRFMARER SSRDKNIPPK STNDFILGHA SWLKVGKLID GYLAEIARDP
401: NVSLSIFIEL LQSIPDSARP IHDALYEAID IYLQEHSSLT KAEKKHLCGL MDVRKLTMDA SMHAAQNERL PLRTVVQVLF FEQIRAAAGV QTLNHRNTDA
501: VDSSRMTEKE YWQKTLPEKQ NVSKSSSEIK IKGEDPQKNM KLVKKGSKNR SSGPQLMPSR SRRIFDKLFI GKVSGNGENR SSETSGSSQS PTLRIIQGEM
601: KSSCASSRNR RNSIS

Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)

001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S

Arabidopsis Description

NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.